Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.37■□□□□ 0.85
CCDC187A0A096LP49 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC187A0A096LP49 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.37■□□□□ 0.85
CCDC187A0A096LP49 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC187A0A096LP49 AC007322.4-201ENST00000509611 723 ntBASIC20.37■□□□□ 0.85
CCDC187A0A096LP49 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.37■□□□□ 0.85
CCDC187A0A096LP49 AC053503.5-201ENST00000601508 636 ntBASIC20.37■□□□□ 0.85
CCDC187A0A096LP49 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC187A0A096LP49 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CCDC187A0A096LP49 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CCDC187A0A096LP49 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC187A0A096LP49 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC187A0A096LP49 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC187A0A096LP49 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC187A0A096LP49 AC068338.2-201ENST00000563278 1430 ntBASIC20.36■□□□□ 0.85
CCDC187A0A096LP49 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC187A0A096LP49 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC187A0A096LP49 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC187A0A096LP49 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC187A0A096LP49 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CCDC187A0A096LP49 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC187A0A096LP49 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC187A0A096LP49 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.36■□□□□ 0.85
CCDC187A0A096LP49 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC187A0A096LP49 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC187A0A096LP49 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.36■□□□□ 0.85
CCDC187A0A096LP49 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.36■□□□□ 0.85
CCDC187A0A096LP49 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.36■□□□□ 0.85
CCDC187A0A096LP49 MKRN4P-201ENST00000444706 1521 ntBASIC20.36■□□□□ 0.85
CCDC187A0A096LP49 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC187A0A096LP49 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CCDC187A0A096LP49 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC187A0A096LP49 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC187A0A096LP49 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC187A0A096LP49 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.35■□□□□ 0.85
CCDC187A0A096LP49 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC187A0A096LP49 OR10C1-204ENST00000622521 1039 ntBASIC20.35■□□□□ 0.85
CCDC187A0A096LP49 AC008694.1-202ENST00000636953 945 ntBASIC20.35■□□□□ 0.85
CCDC187A0A096LP49 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC187A0A096LP49 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
CCDC187A0A096LP49 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CCDC187A0A096LP49 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC187A0A096LP49 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC187A0A096LP49 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC187A0A096LP49 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC187A0A096LP49 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC187A0A096LP49 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC187A0A096LP49 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CCDC187A0A096LP49 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC187A0A096LP49 MIPEPP3-201ENST00000412105 444 ntBASIC20.34■□□□□ 0.85
CCDC187A0A096LP49 POU5F1P3-201ENST00000428824 1078 ntBASIC20.34■□□□□ 0.85
CCDC187A0A096LP49 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC187A0A096LP49 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CCDC187A0A096LP49 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.34■□□□□ 0.85
CCDC187A0A096LP49 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC187A0A096LP49 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.34■□□□□ 0.85
CCDC187A0A096LP49 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC187A0A096LP49 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC187A0A096LP49 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CCDC187A0A096LP49 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC187A0A096LP49 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC187A0A096LP49 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC187A0A096LP49 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC187A0A096LP49 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC187A0A096LP49 RNA5SP413-201ENST00000516373 109 ntBASIC20.33■□□□□ 0.85
CCDC187A0A096LP49 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC187A0A096LP49 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
CCDC187A0A096LP49 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC187A0A096LP49 AC069236.1-201ENST00000604339 616 ntBASIC20.33■□□□□ 0.85
CCDC187A0A096LP49 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC187A0A096LP49 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.33■□□□□ 0.84
CCDC187A0A096LP49 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC187A0A096LP49 AP006587.3-201ENST00000525742 1516 ntBASIC20.32■□□□□ 0.84
CCDC187A0A096LP49 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC187A0A096LP49 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC187A0A096LP49 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CCDC187A0A096LP49 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC187A0A096LP49 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC187A0A096LP49 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC187A0A096LP49 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC187A0A096LP49 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC187A0A096LP49 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.32■□□□□ 0.84
CCDC187A0A096LP49 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CCDC187A0A096LP49 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CCDC187A0A096LP49 AC120498.10-201ENST00000621827 505 ntBASIC20.32■□□□□ 0.84
CCDC187A0A096LP49 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC187A0A096LP49 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC187A0A096LP49 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC187A0A096LP49 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC187A0A096LP49 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC187A0A096LP49 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC187A0A096LP49 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC187A0A096LP49 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC187A0A096LP49 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC187A0A096LP49 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC187A0A096LP49 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC187A0A096LP49 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC187A0A096LP49 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC187A0A096LP49 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC187A0A096LP49 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms