Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV26-1A0A087WT03 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV26-1A0A087WT03 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV26-1A0A087WT03 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV26-1A0A087WT03 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV26-1A0A087WT03 AC087239.1-201ENST00000622671 572 ntBASIC15.38■□□□□ 0.05
TRAV26-1A0A087WT03 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV26-1A0A087WT03 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV26-1A0A087WT03 AL117328.2-201ENST00000624617 1940 ntBASIC15.38■□□□□ 0.05
TRAV26-1A0A087WT03 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV26-1A0A087WT03 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV26-1A0A087WT03 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
TRAV26-1A0A087WT03 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV26-1A0A087WT03 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV26-1A0A087WT03 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV26-1A0A087WT03 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV26-1A0A087WT03 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV26-1A0A087WT03 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV26-1A0A087WT03 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC15.37■□□□□ 0.05
TRAV26-1A0A087WT03 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TRAV26-1A0A087WT03 AC007375.3-201ENST00000600936 2314 ntBASIC15.37■□□□□ 0.05
TRAV26-1A0A087WT03 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TRAV26-1A0A087WT03 RBM38-205ENST00000440234 686 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV26-1A0A087WT03 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TRAV26-1A0A087WT03 MPST-208ENST00000628507 698 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV26-1A0A087WT03 AC068587.7-201ENST00000641602 218 ntBASIC15.37■□□□□ 0.05
TRAV26-1A0A087WT03 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TRAV26-1A0A087WT03 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV26-1A0A087WT03 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV26-1A0A087WT03 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV26-1A0A087WT03 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV26-1A0A087WT03 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV26-1A0A087WT03 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV26-1A0A087WT03 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV26-1A0A087WT03 EI24-211ENST00000534546 1544 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV26-1A0A087WT03 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV26-1A0A087WT03 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV26-1A0A087WT03 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV26-1A0A087WT03 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV26-1A0A087WT03 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV26-1A0A087WT03 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV26-1A0A087WT03 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV26-1A0A087WT03 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV26-1A0A087WT03 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV26-1A0A087WT03 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV26-1A0A087WT03 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV26-1A0A087WT03 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV26-1A0A087WT03 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
TRAV26-1A0A087WT03 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV26-1A0A087WT03 AICDA-202ENST00000537228 667 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV26-1A0A087WT03 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
TRAV26-1A0A087WT03 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
TRAV26-1A0A087WT03 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV26-1A0A087WT03 AC019069.1-201ENST00000610008 1333 ntBASIC15.36■□□□□ 0.05
TRAV26-1A0A087WT03 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV26-1A0A087WT03 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV26-1A0A087WT03 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRAV26-1A0A087WT03 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV26-1A0A087WT03 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV26-1A0A087WT03 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV26-1A0A087WT03 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV26-1A0A087WT03 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV26-1A0A087WT03 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
TRAV26-1A0A087WT03 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TRAV26-1A0A087WT03 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV26-1A0A087WT03 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV26-1A0A087WT03 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV26-1A0A087WT03 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV26-1A0A087WT03 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV26-1A0A087WT03 EBPL-204ENST00000378272 766 ntTSL 3 BASIC15.35■□□□□ 0.05
TRAV26-1A0A087WT03 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC15.35■□□□□ 0.05
TRAV26-1A0A087WT03 AP005435.1-201ENST00000529293 1178 ntBASIC15.35■□□□□ 0.05
TRAV26-1A0A087WT03 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV26-1A0A087WT03 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
TRAV26-1A0A087WT03 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV26-1A0A087WT03 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV26-1A0A087WT03 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV26-1A0A087WT03 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV26-1A0A087WT03 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV26-1A0A087WT03 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV26-1A0A087WT03 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV26-1A0A087WT03 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV26-1A0A087WT03 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV26-1A0A087WT03 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV26-1A0A087WT03 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV26-1A0A087WT03 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAV26-1A0A087WT03 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV26-1A0A087WT03 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV26-1A0A087WT03 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
TRAV26-1A0A087WT03 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAV26-1A0A087WT03 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
TRAV26-1A0A087WT03 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV26-1A0A087WT03 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRAV26-1A0A087WT03 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV26-1A0A087WT03 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV26-1A0A087WT03 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV26-1A0A087WT03 AC105265.2-201ENST00000467189 838 ntBASIC15.34■□□□□ 0.05
TRAV26-1A0A087WT03 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC15.34■□□□□ 0.05
TRAV26-1A0A087WT03 AL031602.1-201ENST00000633169 911 ntBASIC15.34■□□□□ 0.05
TRAV26-1A0A087WT03 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms