Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 LINC00589-201ENST00000506121 1404 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 BOLL-202ENST00000321801 3135 ntAPPRIS P4 TSL 2 BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 CYP8B1-202ENST00000437102 1896 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 MOV10-203ENST00000369645 3552 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 CDYL-202ENST00000343762 3241 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 NADK-204ENST00000378625 3653 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 SERPINA1-202ENST00000393087 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 POGLUT1-201ENST00000295588 3533 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 PPARD-205ENST00000448077 3516 ntTSL 2 BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 PSAT1-202ENST00000376588 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 NOS3-203ENST00000461406 3644 ntTSL 2 BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 MIEF1-201ENST00000325301 5625 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 SH3RF2-206ENST00000511217 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 AC005837.1-201ENST00000565271 1717 ntBASIC12.38□□□□□ -0.43
LMO3Q8TAP4 SEPT2-204ENST00000391973 3701 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 LST1-206ENST00000376090 689 ntTSL 2 BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 LST1-210ENST00000376099 610 ntTSL 2 BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 PPP1R2P10-201ENST00000393023 595 ntBASIC12.38□□□□□ -0.43
LMO3Q8TAP4 AGAP13P-201ENST00000417888 363 ntBASIC12.38□□□□□ -0.43
LMO3Q8TAP4 LST1-214ENST00000418507 726 ntTSL 2 BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 NME6-207ENST00000426689 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 CR383656.9-201ENST00000546860 1178 ntBASIC12.38□□□□□ -0.43
LMO3Q8TAP4 NARF-IT1-201ENST00000584012 769 ntTSL 5 BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 PTOV1-AS2-201ENST00000593654 596 ntTSL 2 BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 PTPN7-219ENST00000629151 437 ntTSL 5 BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 MIR941-1-201ENST00000636396 72 ntBASIC12.38□□□□□ -0.43
LMO3Q8TAP4 PRAMEF11-201ENST00000619922 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 UPF3B-204ENST00000619445 1385 ntTSL 5 BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 PDCD4-202ENST00000393104 3697 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 ADD1-210ENST00000503455 3206 ntTSL 5 BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 SLC37A2-201ENST00000308074 2696 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 STAG3L4-202ENST00000416602 2143 ntTSL 2 BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 MAP3K9-204ENST00000554146 2982 ntTSL 2 BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 C1orf186-201ENST00000331555 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 NT5C3AP1-202ENST00000441170 1663 ntBASIC12.38□□□□□ -0.43
LMO3Q8TAP4 AC026746.1-203ENST00000513386 1676 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 LINC00551-201ENST00000607593 1668 ntTSL 2 BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 GPR176-202ENST00000543580 1755 ntTSL 2 BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 HNRNPR-201ENST00000302271 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 IER3IP1-201ENST00000256433 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 HMGB1-206ENST00000405805 4199 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 HHAT-206ENST00000537898 3446 ntTSL 2 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 ZFP64-202ENST00000346617 2876 ntTSL 2 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 GBP6-201ENST00000370456 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 HS6ST2-202ENST00000370836 4441 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 PER1-211ENST00000581082 4521 ntTSL 5 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 HPS1-204ENST00000361490 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 ZSCAN31-201ENST00000344279 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 MAP3K13-210ENST00000446828 2737 ntTSL 2 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 IKBKE-203ENST00000581977 3221 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 RPS16-201ENST00000251453 560 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 CELA1-201ENST00000293636 952 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 PRDX1-203ENST00000372079 609 ntTSL 3 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 C1QTNF9B-201ENST00000382137 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 SMIM11A-201ENST00000399292 850 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 AC092814.1-201ENST00000416056 386 ntBASIC12.37□□□□□ -0.43
LMO3Q8TAP4 KRTAP4-16-201ENST00000440582 708 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 CR769776.2-201ENST00000445057 378 ntBASIC12.37□□□□□ -0.43
LMO3Q8TAP4 LINC00408-201ENST00000447784 560 ntTSL 5 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 AC016304.1-201ENST00000476363 413 ntBASIC12.37□□□□□ -0.43
LMO3Q8TAP4 AC083841.3-202ENST00000519411 349 ntTSL 5 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 ENPP7P12-201ENST00000526818 631 ntBASIC12.37□□□□□ -0.43
LMO3Q8TAP4 ENPP7P6-201ENST00000529817 929 ntBASIC12.37□□□□□ -0.43
LMO3Q8TAP4 DYNLL1-211ENST00000552870 595 ntTSL 2 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 DIO3OS-209ENST00000556266 401 ntTSL 3 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 AC104041.1-202ENST00000560097 566 ntTSL 4 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 NASP-225ENST00000629893 253 ntTSL 5 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 EPS8-212ENST00000543523 3925 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 SMAD4-205ENST00000588745 1371 ntTSL 5 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 CRISP2-203ENST00000618917 1492 ntTSL 5 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 C20orf96-201ENST00000360321 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 AC106799.1-201ENST00000503188 1676 ntTSL 2 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 HGSNAT-201ENST00000379644 5236 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 GCA-204ENST00000437150 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 EBAG9-201ENST00000337573 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 LINC01634-201ENST00000443243 2379 ntTSL 2 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 INPP5B-203ENST00000373024 3060 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 LIMK2-202ENST00000333611 3462 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 OSBP2-208ENST00000437268 3580 ntTSL 2 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 URGCP-205ENST00000443736 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms