Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AL049836.1-201ENST00000553270 539 ntTSL 3 BASIC12.26□□□□□ -0.45
MTHFRP42898 AL117694.1-201ENST00000555136 300 ntBASIC12.26□□□□□ -0.45
MTHFRP42898 AC018552.4-201ENST00000563251 556 ntTSL 4 BASIC12.26□□□□□ -0.45
MTHFRP42898 BLOC1S6-208ENST00000565323 688 ntTSL 2 BASIC12.26□□□□□ -0.45
MTHFRP42898 AC010524.1-201ENST00000596488 494 ntTSL 3 BASIC12.26□□□□□ -0.45
MTHFRP42898 NAMA-205ENST00000605043 551 ntTSL 5 BASIC12.26□□□□□ -0.45
MTHFRP42898 AL360272.1-201ENST00000605501 585 ntBASIC12.26□□□□□ -0.45
MTHFRP42898 AC005740.4-201ENST00000607378 957 ntBASIC12.26□□□□□ -0.45
MTHFRP42898 AC002401.4-201ENST00000612365 583 ntBASIC12.26□□□□□ -0.45
MTHFRP42898 AL662899.3-202ENST00000617558 991 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
MTHFRP42898 AL512324.1-201ENST00000618885 217 ntBASIC12.26□□□□□ -0.45
MTHFRP42898 MIR8083-201ENST00000620823 89 ntBASIC12.26□□□□□ -0.45
MTHFRP42898 SNHG3-202ENST00000437681 2614 ntTSL 2 BASIC12.26□□□□□ -0.45
MTHFRP42898 LBP-201ENST00000217407 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MTHFRP42898 RBMX-201ENST00000320676 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MTHFRP42898 PPP4R3A-206ENST00000554943 3369 ntTSL 5 BASIC12.26□□□□□ -0.45
MTHFRP42898 PFDN1-201ENST00000261813 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MTHFRP42898 CMTR2-202ENST00000434935 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MTHFRP42898 ZNF544-208ENST00000596825 3516 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
MTHFRP42898 MAPK9-205ENST00000397072 1416 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
MTHFRP42898 AL358472.2-201ENST00000608236 1418 ntBASIC12.26□□□□□ -0.45
MTHFRP42898 SPCS1-206ENST00000619898 4254 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
MTHFRP42898 CARF-213ENST00000438828 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MTHFRP42898 APTX-208ENST00000436040 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
MTHFRP42898 AKR1C8P-201ENST00000578467 2182 ntTSL 2 BASIC12.26□□□□□ -0.45
MTHFRP42898 POLR3E-201ENST00000299853 3697 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MTHFRP42898 ST3GAL5-204ENST00000393808 2236 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
MTHFRP42898 IL21R-202ENST00000395754 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MTHFRP42898 DNAJC9-201ENST00000372950 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MTHFRP42898 BLOC1S5-TXNDC5-201ENST00000439343 3030 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
MTHFRP42898 ZNF23-201ENST00000357254 3186 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
MTHFRP42898 SLC38A1-206ENST00000549049 3196 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MTHFRP42898 CLINT1-206ENST00000523094 3987 ntTSL 2 BASIC12.26□□□□□ -0.45
MTHFRP42898 SPATA2-201ENST00000289431 4022 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MTHFRP42898 TRERF1-202ENST00000354325 4138 ntTSL 5 BASIC12.26□□□□□ -0.45
MTHFRP42898 GPC3-201ENST00000370818 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MTHFRP42898 C8orf44-203ENST00000519561 1835 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
MTHFRP42898 UMPS-201ENST00000232607 6738 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MTHFRP42898 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
MTHFRP42898 TBC1D3P5-203ENST00000586223 3083 ntTSL 2 BASIC12.25□□□□□ -0.45
MTHFRP42898 PAX9-202ENST00000402703 3104 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
MTHFRP42898 TIPARP-202ENST00000461166 4181 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MTHFRP42898 AC010969.2-201ENST00000602458 3231 ntBASIC12.25□□□□□ -0.45
MTHFRP42898 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MTHFRP42898 AIF1L-206ENST00000372302 3340 ntTSL 2 BASIC12.25□□□□□ -0.45
MTHFRP42898 AC006037.2-201ENST00000622975 2232 ntBASIC12.25□□□□□ -0.45
MTHFRP42898 ANP32D-201ENST00000266594 960 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
MTHFRP42898 OR51V1-201ENST00000321255 966 ntBASIC12.25□□□□□ -0.45
MTHFRP42898 H3F3A-203ENST00000366815 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MTHFRP42898 PPP1R2P9-201ENST00000378131 880 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
MTHFRP42898 RBFOX2-208ENST00000416721 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MTHFRP42898 BX664727.2-201ENST00000420308 228 ntBASIC12.25□□□□□ -0.45
MTHFRP42898 NTM-IT-201ENST00000421651 373 ntTSL 3 BASIC12.25□□□□□ -0.45
MTHFRP42898 AL162386.1-201ENST00000433817 645 ntBASIC12.25□□□□□ -0.45
MTHFRP42898 AC007652.1-201ENST00000441150 562 ntTSL 4 BASIC12.25□□□□□ -0.45
MTHFRP42898 LINC01005-201ENST00000441691 540 ntTSL 4 BASIC12.25□□□□□ -0.45
MTHFRP42898 SMARCE1P2-201ENST00000442896 1219 ntBASIC12.25□□□□□ -0.45
MTHFRP42898 DTNBP1-204ENST00000462989 1010 ntTSL 3 BASIC12.25□□□□□ -0.45
MTHFRP42898 PSORS1C1-204ENST00000481450 501 ntTSL 2 BASIC12.25□□□□□ -0.45
MTHFRP42898 AC108471.2-202ENST00000529094 498 ntTSL 5 BASIC12.25□□□□□ -0.45
MTHFRP42898 FTH1-203ENST00000529191 530 ntTSL 2 BASIC12.25□□□□□ -0.45
MTHFRP42898 DUXAP9-202ENST00000549484 596 ntTSL 2 BASIC12.25□□□□□ -0.45
MTHFRP42898 AC009035.1-201ENST00000562900 717 ntTSL 3 BASIC12.25□□□□□ -0.45
MTHFRP42898 AL135818.2-201ENST00000563574 705 ntBASIC12.25□□□□□ -0.45
MTHFRP42898 TEX26-AS1-206ENST00000586464 851 ntTSL 5 BASIC12.25□□□□□ -0.45
MTHFRP42898 AC245884.9-201ENST00000596631 483 ntBASIC12.25□□□□□ -0.45
MTHFRP42898 DUXAP10-203ENST00000610531 596 ntTSL 2 BASIC12.25□□□□□ -0.45
MTHFRP42898 CR848007.3-201ENST00000615762 228 ntBASIC12.25□□□□□ -0.45
MTHFRP42898 Metazoa_SRP.125-201ENST00000618659 283 ntBASIC12.25□□□□□ -0.45
MTHFRP42898 IGLV2-8-201ENST00000620395 517 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
MTHFRP42898 Metazoa_SRP.177-201ENST00000621099 283 ntBASIC12.25□□□□□ -0.45
MTHFRP42898 AL513478.1-201ENST00000621265 228 ntBASIC12.25□□□□□ -0.45
MTHFRP42898 OR51V1-202ENST00000641270 948 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
MTHFRP42898 AL031430.1-201ENST00000642067 1039 ntBASIC12.25□□□□□ -0.45
MTHFRP42898 ADGRF3-202ENST00000333478 3896 ntTSL 5 BASIC12.25□□□□□ -0.45
MTHFRP42898 MICAL2-201ENST00000256194 3906 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
MTHFRP42898 CLCC1-201ENST00000302500 1316 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
MTHFRP42898 TSPEAR-204ENST00000614657 4027 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
MTHFRP42898 CDC14A-201ENST00000336454 4137 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MTHFRP42898 SLC28A1-202ENST00000338602 1360 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
MTHFRP42898 SLC12A8-202ENST00000430155 2831 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
MTHFRP42898 JRKL-201ENST00000332349 2855 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
MTHFRP42898 COG7-201ENST00000307149 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MTHFRP42898 LINC02002-201ENST00000578977 1481 ntTSL 2 BASIC12.25□□□□□ -0.45
MTHFRP42898 RINT1-201ENST00000257700 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MTHFRP42898 CHTF8P1-201ENST00000414660 1541 ntBASIC12.25□□□□□ -0.45
MTHFRP42898 TMEM199-201ENST00000292114 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MTHFRP42898 CEP63-216ENST00000620544 1601 ntTSL 5 BASIC12.25□□□□□ -0.45
MTHFRP42898 METTL13-201ENST00000361735 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MTHFRP42898 AL133467.2-201ENST00000555032 1714 ntTSL 4 BASIC12.25□□□□□ -0.45
MTHFRP42898 TMEM174-201ENST00000296776 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MTHFRP42898 KRT34-201ENST00000394001 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MTHFRP42898 KIAA1147-201ENST00000482493 1847 ntTSL 5 BASIC12.25□□□□□ -0.45
MTHFRP42898 GRHL3-201ENST00000236255 1870 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
MTHFRP42898 RPL13AP17-204ENST00000450028 1895 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
MTHFRP42898 EIF4B-203ENST00000420463 1936 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
MTHFRP42898 MSANTD4-201ENST00000301919 4087 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MTHFRP42898 RAB43-205ENST00000393308 4193 ntAPPRIS P1 TSL 4 BASIC12.25□□□□□ -0.45
MTHFRP42898 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC12.25□□□□□ -0.45
MTHFRP42898 DNAL1-201ENST00000311089 2312 ntTSL 2 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms