Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 NFASC-202ENST00000360049 10120 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
SLC1A1P43005 NFASC-225ENST00000539706 10135 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
SLC1A1P43005 PEG10-203ENST00000488574 2587 ntTSL 2 BASIC12.25□□□□□ -0.45
SLC1A1P43005 PTPN2-201ENST00000309660 3467 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SLC1A1P43005 LIMK2-202ENST00000333611 3462 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SLC1A1P43005 ATP2A1-202ENST00000395503 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SLC1A1P43005 ARHGAP36-203ENST00000370922 2736 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SLC1A1P43005 CACNB2-208ENST00000377331 1827 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SLC1A1P43005 AL512791.2-201ENST00000615251 4609 ntBASIC12.25□□□□□ -0.45
SLC1A1P43005 FAM153B-201ENST00000253490 1913 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
SLC1A1P43005 FAM153A-223ENST00000614127 1912 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
SLC1A1P43005 TMEM198B-202ENST00000478241 2924 ntTSL 2 BASIC12.25□□□□□ -0.45
SLC1A1P43005 UBASH3B-201ENST00000284273 6912 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SLC1A1P43005 PRPH2-201ENST00000230381 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SLC1A1P43005 CRP-201ENST00000255030 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SLC1A1P43005 DNAJB12-203ENST00000444643 3278 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SLC1A1P43005 TIAM2-206ENST00000456877 3275 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SLC1A1P43005 MAP3K3-208ENST00000579585 3352 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SLC1A1P43005 TLE4-201ENST00000265284 2382 ntTSL 2 BASIC12.25□□□□□ -0.45
SLC1A1P43005 CSE1L-201ENST00000262982 3553 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SLC1A1P43005 AC011899.1-201ENST00000436489 3600 ntTSL 2 BASIC12.25□□□□□ -0.45
SLC1A1P43005 MUC21-202ENST00000486149 2527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SLC1A1P43005 OR13C9-201ENST00000259362 957 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
SLC1A1P43005 XPC-201ENST00000285021 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SLC1A1P43005 CHCHD5-201ENST00000324913 691 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SLC1A1P43005 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SLC1A1P43005 AC019294.1-201ENST00000395215 1184 ntTSL 2 BASIC12.25□□□□□ -0.45
SLC1A1P43005 AL451074.1-201ENST00000400982 1216 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SLC1A1P43005 SUCLA2-AS1-201ENST00000423869 552 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SLC1A1P43005 RN7SL677P-201ENST00000466970 319 ntBASIC12.25□□□□□ -0.45
SLC1A1P43005 MYLK-AS1-203ENST00000485162 587 ntTSL 4 BASIC12.25□□□□□ -0.45
SLC1A1P43005 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
SLC1A1P43005 AP001922.3-201ENST00000524768 842 ntTSL 3 BASIC12.25□□□□□ -0.45
SLC1A1P43005 SLC25A3-212ENST00000549338 1285 ntAPPRIS ALT1 TSL 3 BASIC12.25□□□□□ -0.45
SLC1A1P43005 RABGGTA-218ENST00000560777 1197 ntTSL 5 BASIC12.25□□□□□ -0.45
SLC1A1P43005 AC124319.1-201ENST00000576808 653 ntTSL 5 BASIC12.25□□□□□ -0.45
SLC1A1P43005 AC010615.2-201ENST00000596705 566 ntTSL 4 BASIC12.25□□□□□ -0.45
SLC1A1P43005 SARS2-211ENST00000598831 665 ntTSL 5 BASIC12.25□□□□□ -0.45
SLC1A1P43005 AP002986.1-203ENST00000602310 330 ntTSL 3 BASIC12.25□□□□□ -0.45
SLC1A1P43005 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC12.25□□□□□ -0.45
SLC1A1P43005 GOSR2-237ENST00000640443 3929 ntTSL 5 BASIC12.25□□□□□ -0.45
SLC1A1P43005 KRT18P45-201ENST00000515347 1333 ntBASIC12.25□□□□□ -0.45
SLC1A1P43005 TOPORS-201ENST00000360538 4098 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SLC1A1P43005 FAM196A-201ENST00000424811 3149 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SLC1A1P43005 AC093642.2-201ENST00000625132 4805 ntBASIC12.25□□□□□ -0.45
SLC1A1P43005 PSIP1-205ENST00000397519 1664 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SLC1A1P43005 SIRPB1-204ENST00000381603 1715 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SLC1A1P43005 HSPA2-202ENST00000394709 5400 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SLC1A1P43005 MYO18B-201ENST00000335473 8565 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SLC1A1P43005 SDCBP2-AS1-204ENST00000609470 2158 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SLC1A1P43005 ACSL1-210ENST00000513317 2469 ntAPPRIS ALT1 TSL 2 BASIC12.25□□□□□ -0.45
SLC1A1P43005 CELSR2-201ENST00000271332 10534 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SLC1A1P43005 LINC00910-202ENST00000586231 2890 ntTSL 2 BASIC12.24□□□□□ -0.45
SLC1A1P43005 SRRT-216ENST00000618262 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SLC1A1P43005 SYNE1-204ENST00000367248 7165 ntTSL 5 BASIC12.24□□□□□ -0.45
SLC1A1P43005 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SLC1A1P43005 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SLC1A1P43005 NAMPT-201ENST00000222553 4582 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SLC1A1P43005 COIL-201ENST00000240316 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SLC1A1P43005 HRASLS2-201ENST00000255695 742 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
SLC1A1P43005 CMKLR1-201ENST00000312143 5283 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
SLC1A1P43005 APOL4-202ENST00000332987 1825 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
SLC1A1P43005 IGHV1OR15-9-201ENST00000338912 353 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
SLC1A1P43005 ZFP64-202ENST00000346617 2876 ntTSL 2 BASIC12.24□□□□□ -0.45
SLC1A1P43005 OOEP-202ENST00000370363 1007 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SLC1A1P43005 CTCFL-202ENST00000371196 3491 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SLC1A1P43005 SLC25A25-201ENST00000373064 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SLC1A1P43005 TCF19-201ENST00000376255 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SLC1A1P43005 AP1S2-202ENST00000380291 3492 ntTSL 2 BASIC12.24□□□□□ -0.45
SLC1A1P43005 FKBP1A-201ENST00000381715 705 ntTSL 2 BASIC12.24□□□□□ -0.45
SLC1A1P43005 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
SLC1A1P43005 RPL10P4-201ENST00000412093 308 ntBASIC12.24□□□□□ -0.45
SLC1A1P43005 AC245060.2-201ENST00000412149 524 ntTSL 3 BASIC12.24□□□□□ -0.45
SLC1A1P43005 HNRNPA1P49-201ENST00000421336 904 ntBASIC12.24□□□□□ -0.45
SLC1A1P43005 RPL12P45-201ENST00000428087 478 ntBASIC12.24□□□□□ -0.45
SLC1A1P43005 AC006960.2-201ENST00000435254 531 ntTSL 4 BASIC12.24□□□□□ -0.45
SLC1A1P43005 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SLC1A1P43005 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
SLC1A1P43005 Z84721.1-201ENST00000438841 372 ntBASIC12.24□□□□□ -0.45
SLC1A1P43005 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC12.24□□□□□ -0.45
SLC1A1P43005 BTNL2-203ENST00000454136 1460 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
SLC1A1P43005 RN7SL111P-201ENST00000468841 285 ntBASIC12.24□□□□□ -0.45
SLC1A1P43005 AC106865.1-202ENST00000507055 2292 ntBASIC12.24□□□□□ -0.45
SLC1A1P43005 RAE1-209ENST00000527947 1503 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SLC1A1P43005 CHIAP2-204ENST00000532686 1449 ntBASIC12.24□□□□□ -0.45
SLC1A1P43005 ST5-258ENST00000534278 1352 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SLC1A1P43005 TRMT112-205ENST00000539854 659 ntTSL 2 BASIC12.24□□□□□ -0.45
SLC1A1P43005 PDYN-203ENST00000540134 2472 ntAPPRIS P1 TSL 4 BASIC12.24□□□□□ -0.45
SLC1A1P43005 SLC22A8-210ENST00000545207 1622 ntTSL 2 BASIC12.24□□□□□ -0.45
SLC1A1P43005 TMEM263-209ENST00000551813 1483 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
SLC1A1P43005 AC079310.1-201ENST00000552524 700 ntTSL 3 BASIC12.24□□□□□ -0.45
SLC1A1P43005 AC084064.1-201ENST00000569938 419 ntTSL 2 BASIC12.24□□□□□ -0.45
SLC1A1P43005 SH3GL1P2-201ENST00000582245 1082 ntBASIC12.24□□□□□ -0.45
SLC1A1P43005 AC092069.1-201ENST00000589120 270 ntTSL 3 BASIC12.24□□□□□ -0.45
SLC1A1P43005 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC12.24□□□□□ -0.45
SLC1A1P43005 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC12.24□□□□□ -0.45
SLC1A1P43005 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC12.24□□□□□ -0.45
SLC1A1P43005 NRP1-208ENST00000395995 5826 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SLC1A1P43005 DAPK1-219ENST00000622514 5772 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SLC1A1P43005 AC106820.4-201ENST00000561847 5616 ntBASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms