Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC008073.2-202ENST00000438414 674 ntTSL 3 BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 LINC01697-204ENST00000458316 1122 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 IGKV2D-24-201ENST00000462693 390 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 LAIR1-217ENST00000474878 814 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 AK2-206ENST00000480134 811 ntTSL 2 BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 IGKV2-24-201ENST00000484817 390 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 GNGT2-202ENST00000503070 522 ntTSL 3 BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 MAX-216ENST00000556979 615 ntTSL 3 BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 AC013489.2-201ENST00000558732 276 ntBASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 TRAPPC2L-202ENST00000561840 558 ntTSL 5 BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 AC087463.4-201ENST00000561964 448 ntTSL 5 BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 MIR3689A-201ENST00000578854 78 ntBASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 AC104365.2-201ENST00000586383 740 ntTSL 3 BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 KRTAP10-9-203ENST00000616529 615 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 AL161669.3-201ENST00000618272 777 ntBASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 AC016292.2-201ENST00000618967 210 ntBASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 AL627230.3-201ENST00000622239 192 ntBASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 KCND2-201ENST00000331113 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 PLXNA3-201ENST00000369682 10885 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 WWC2-205ENST00000504005 5247 ntTSL 2 BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 ANXA4-201ENST00000394295 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 ARMC8-221ENST00000491704 2777 ntTSL 5 BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 AL035448.1-201ENST00000439529 1831 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 EPHA6-201ENST00000389672 3971 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 PHKA1-203ENST00000373542 6020 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 SPATA13-202ENST00000382095 6665 ntAPPRIS P3 TSL 2 BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 SHROOM2P1-201ENST00000434773 2384 ntBASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 SULF2-211ENST00000484875 4238 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 SMTNL1-201ENST00000399154 1536 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 WDR92-203ENST00000409164 1517 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 ACSM2B-202ENST00000414188 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 DPY19L2P2-204ENST00000438364 3947 ntTSL 2 BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 ITGA7-213ENST00000555728 3930 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 RFC4-202ENST00000392481 1448 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 GMPR2-202ENST00000355299 1972 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 ESR1-207ENST00000440973 6466 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 BEST3-201ENST00000266661 1876 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 PSMC1P1-201ENST00000478110 1320 ntBASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 ANKRD27-204ENST00000587352 3301 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 MPP2-220ENST00000622681 4242 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 FSCN3-201ENST00000265825 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 ZNF155-202ENST00000407951 2222 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 CLDN10-203ENST00000376873 2656 ntTSL 2 BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 FBXO39-201ENST00000321535 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 C2CD2-201ENST00000329623 5844 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 DRC1-201ENST00000288710 2491 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 ZZEF1-201ENST00000381638 11456 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 PIAS3-203ENST00000393045 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 PLA2G4C-219ENST00000599111 2458 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 RNF13-203ENST00000392894 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 BEND3-201ENST00000369042 6200 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 MYO19-213ENST00000614623 4054 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 SOHLH2-201ENST00000317764 1909 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 KLK7-202ENST00000391807 1912 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 PIGB-201ENST00000164305 2172 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 TIRAP-202ENST00000392679 2195 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 AC007277.1-201ENST00000428156 2189 ntTSL 2 BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 AL021877.1-201ENST00000457251 2194 ntBASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 AKT2-201ENST00000311278 1393 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 NUP62-201ENST00000352066 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 STIM1-218ENST00000533977 2080 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 RFC5-201ENST00000392542 2449 ntTSL 2 BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 PTPRK-221ENST00000532331 5757 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 S100A7A-202ENST00000368728 440 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 SH3YL1-204ENST00000403658 1279 ntTSL 2 BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 AC007128.2-201ENST00000435967 557 ntTSL 4 BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 AL390726.1-201ENST00000451357 202 ntBASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 GIMD1-201ENST00000507153 654 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 AC096713.1-201ENST00000514650 978 ntBASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 OR7E126P-201ENST00000526217 888 ntBASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 RPL38-206ENST00000533498 532 ntAPPRIS P2 TSL 2 BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 MNAT1-202ENST00000539616 1220 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 GLTP-205ENST00000544393 914 ntTSL 3 BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 RAB5C-204ENST00000547517 1167 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 AP002478.2-201ENST00000584060 557 ntTSL 4 BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 SLC25A1P5-201ENST00000587610 783 ntBASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 OPN1MW-201ENST00000595290 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 AC022150.2-201ENST00000596451 644 ntTSL 3 BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 MIR6750-201ENST00000617817 75 ntBASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 PSMB3-211ENST00000619426 773 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 Metazoa_SRP.95-201ENST00000619648 282 ntBASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 AC244230.1-201ENST00000623463 498 ntTSL 5 BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 FAM25BP-203ENST00000624613 404 ntTSL 3 BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 KLHL38-201ENST00000325995 1982 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 VIL1-202ENST00000392114 1968 ntTSL 2 BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 CYP3A4-202ENST00000354593 2342 ntTSL 5 BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 AIF1L-201ENST00000247291 3364 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 SPECC1L-201ENST00000314328 6756 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 MYO18B-205ENST00000536101 8051 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 ZNF23-201ENST00000357254 3186 ntAPPRIS P3 TSL 2 BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 PLK4-203ENST00000507249 3195 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 ATP6AP1-210ENST00000619046 2823 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 FAM47B-201ENST00000329357 2120 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 AL132656.4-201ENST00000623504 2122 ntBASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 DDR1-262ENST00000508312 3073 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 IL10RA-201ENST00000227752 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms