Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 ZNF384-203ENST00000361959 2978 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
MTHFRP42898 PEX5L-201ENST00000263962 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
MTHFRP42898 PER1-211ENST00000581082 4521 ntTSL 5 BASIC12.4□□□□□ -0.42
MTHFRP42898 SLC39A14-204ENST00000381237 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
MTHFRP42898 TAOK2-201ENST00000279394 4246 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MTHFRP42898 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC12.4□□□□□ -0.42
MTHFRP42898 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
MTHFRP42898 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
MTHFRP42898 SNRNP48-201ENST00000342415 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
MTHFRP42898 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
MTHFRP42898 FLT4-202ENST00000393347 4292 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
MTHFRP42898 ARHGEF2-203ENST00000361247 4149 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
MTHFRP42898 TMBIM6-227ENST00000552699 2964 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
MTHFRP42898 ZIC3-201ENST00000287538 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MTHFRP42898 MYL6B-211ENST00000553066 1305 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
MTHFRP42898 AC053503.6-201ENST00000623864 1843 ntBASIC12.39□□□□□ -0.43
MTHFRP42898 CAST-233ENST00000510756 2310 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
MTHFRP42898 WDR83OS-202ENST00000596731 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
MTHFRP42898 GRM8-201ENST00000339582 4057 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
MTHFRP42898 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
MTHFRP42898 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
MTHFRP42898 SPART-203ENST00000451493 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MTHFRP42898 PPP1R26P5-201ENST00000416640 3664 ntBASIC12.39□□□□□ -0.43
MTHFRP42898 AC008158.1-201ENST00000578759 3668 ntBASIC12.39□□□□□ -0.43
MTHFRP42898 NMT2-202ENST00000378165 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MTHFRP42898 OAS1-208ENST00000551241 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
MTHFRP42898 GRIPAP1-201ENST00000376423 3031 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MTHFRP42898 SCNN1D-202ENST00000338555 3475 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
MTHFRP42898 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC12.39□□□□□ -0.43
MTHFRP42898 SMIM5-202ENST00000537494 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MTHFRP42898 OR4C5-201ENST00000319813 981 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
MTHFRP42898 MRPL55-203ENST00000336520 744 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
MTHFRP42898 IGHV1-2-201ENST00000390594 417 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
MTHFRP42898 IGKV3D-15-201ENST00000417279 396 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
MTHFRP42898 GHRL-203ENST00000422159 401 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
MTHFRP42898 CBWD5-208ENST00000429800 1234 ntTSL 2 BASIC12.39□□□□□ -0.43
MTHFRP42898 MRPL55-221ENST00000430433 864 ntTSL 5 BASIC12.39□□□□□ -0.43
MTHFRP42898 ACTG1P21-201ENST00000431536 1000 ntBASIC12.39□□□□□ -0.43
MTHFRP42898 AC004674.1-201ENST00000458400 739 ntBASIC12.39□□□□□ -0.43
MTHFRP42898 NDUFA2-204ENST00000512088 627 ntTSL 2 BASIC12.39□□□□□ -0.43
MTHFRP42898 AC097487.1-201ENST00000514134 934 ntTSL 3 BASIC12.39□□□□□ -0.43
MTHFRP42898 AC008588.1-201ENST00000514867 462 ntTSL 3 BASIC12.39□□□□□ -0.43
MTHFRP42898 AC104051.1-201ENST00000520426 570 ntTSL 4 BASIC12.39□□□□□ -0.43
MTHFRP42898 AC008740.1-201ENST00000549658 255 ntBASIC12.39□□□□□ -0.43
MTHFRP42898 LINC02256-202ENST00000564670 543 ntTSL 4 BASIC12.39□□□□□ -0.43
MTHFRP42898 AC109446.3-201ENST00000567344 641 ntTSL 3 BASIC12.39□□□□□ -0.43
MTHFRP42898 AC090282.1-202ENST00000575487 515 ntTSL 4 BASIC12.39□□□□□ -0.43
MTHFRP42898 MIR4689-201ENST00000582517 70 ntBASIC12.39□□□□□ -0.43
MTHFRP42898 AC135983.5-201ENST00000604574 144 ntBASIC12.39□□□□□ -0.43
MTHFRP42898 Metazoa_SRP.174-201ENST00000619127 283 ntBASIC12.39□□□□□ -0.43
MTHFRP42898 AL590483.3-201ENST00000623669 3580 ntBASIC12.39□□□□□ -0.43
MTHFRP42898 GSN-205ENST00000373823 3341 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
MTHFRP42898 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MTHFRP42898 FETUB-201ENST00000265029 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MTHFRP42898 ARL6-201ENST00000335979 1630 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
MTHFRP42898 RPL10-218ENST00000618723 2210 ntTSL 5 BASIC12.39□□□□□ -0.43
MTHFRP42898 SPATA6-203ENST00000371847 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MTHFRP42898 DDO-201ENST00000368923 1953 ntTSL 2 BASIC12.39□□□□□ -0.43
MTHFRP42898 NFE2L1-202ENST00000361665 4729 ntTSL 5 BASIC12.39□□□□□ -0.43
MTHFRP42898 ELOVL3-201ENST00000370005 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MTHFRP42898 LARGE1-202ENST00000397394 4138 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
MTHFRP42898 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
MTHFRP42898 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
MTHFRP42898 AL162231.4-201ENST00000564224 3264 ntTSL 2 BASIC12.39□□□□□ -0.43
MTHFRP42898 XAB2-201ENST00000358368 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MTHFRP42898 FAM160A1-201ENST00000435205 4576 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
MTHFRP42898 MROH7-TTC4-201ENST00000414150 5867 ntAPPRIS P5 TSL 2 BASIC12.39□□□□□ -0.43
MTHFRP42898 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MTHFRP42898 NFXL1-201ENST00000329043 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MTHFRP42898 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
MTHFRP42898 HPGD-214ENST00000542498 2786 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
MTHFRP42898 PCNX2-213ENST00000488780 1465 ntTSL 5 BASIC12.39□□□□□ -0.43
MTHFRP42898 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
MTHFRP42898 NPR2-201ENST00000342694 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MTHFRP42898 TMUB2-203ENST00000446571 1580 ntTSL 2 BASIC12.39□□□□□ -0.43
MTHFRP42898 TTI2-204ENST00000520636 1588 ntTSL 5 BASIC12.39□□□□□ -0.43
MTHFRP42898 EHD1-213ENST00000621096 3336 ntTSL 5 BASIC12.39□□□□□ -0.43
MTHFRP42898 ACSF3-218ENST00000614302 3751 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
MTHFRP42898 PHF21B-202ENST00000396103 3540 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
MTHFRP42898 C2orf15-201ENST00000302513 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MTHFRP42898 TGFBI-201ENST00000442011 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MTHFRP42898 CDH3-202ENST00000429102 3611 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
MTHFRP42898 C10orf128-201ENST00000374148 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
MTHFRP42898 CORO7-202ENST00000537233 3392 ntTSL 2 BASIC12.38□□□□□ -0.43
MTHFRP42898 TPT1-212ENST00000530705 4735 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MTHFRP42898 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
MTHFRP42898 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC12.38□□□□□ -0.43
MTHFRP42898 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MTHFRP42898 AC016831.5-201ENST00000605249 1998 ntBASIC12.38□□□□□ -0.43
MTHFRP42898 NFYB-201ENST00000240055 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MTHFRP42898 NT5E-201ENST00000257770 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MTHFRP42898 SLC37A1-202ENST00000398341 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MTHFRP42898 HEXIM1-201ENST00000332499 3600 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
MTHFRP42898 SIRPG-202ENST00000303415 1716 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
MTHFRP42898 SIRPG-204ENST00000381580 1732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
MTHFRP42898 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
MTHFRP42898 EME1-207ENST00000511648 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
MTHFRP42898 SERF2-202ENST00000339624 506 ntTSL 2 BASIC12.38□□□□□ -0.43
MTHFRP42898 SETDB1-203ENST00000368963 1045 ntTSL 5 BASIC12.38□□□□□ -0.43
MTHFRP42898 INSL6-201ENST00000381641 758 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms