Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 NCF1B-203ENST00000435988 1254 ntBASIC21.15■□□□□ 0.98
HS3ST3A1Q9Y663 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.15■□□□□ 0.98
HS3ST3A1Q9Y663 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.15■□□□□ 0.98
HS3ST3A1Q9Y663 AC053503.5-201ENST00000601508 636 ntBASIC21.15■□□□□ 0.98
HS3ST3A1Q9Y663 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HS3ST3A1Q9Y663 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.15■□□□□ 0.98
HS3ST3A1Q9Y663 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HS3ST3A1Q9Y663 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.14■□□□□ 0.98
HS3ST3A1Q9Y663 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.14■□□□□ 0.97
HS3ST3A1Q9Y663 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
HS3ST3A1Q9Y663 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
HS3ST3A1Q9Y663 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HS3ST3A1Q9Y663 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.14■□□□□ 0.97
HS3ST3A1Q9Y663 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HS3ST3A1Q9Y663 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.14■□□□□ 0.97
HS3ST3A1Q9Y663 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
HS3ST3A1Q9Y663 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.14■□□□□ 0.97
HS3ST3A1Q9Y663 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.14■□□□□ 0.97
HS3ST3A1Q9Y663 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HS3ST3A1Q9Y663 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HS3ST3A1Q9Y663 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
HS3ST3A1Q9Y663 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
HS3ST3A1Q9Y663 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.14■□□□□ 0.97
HS3ST3A1Q9Y663 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HS3ST3A1Q9Y663 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HS3ST3A1Q9Y663 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HS3ST3A1Q9Y663 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HS3ST3A1Q9Y663 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.13■□□□□ 0.97
HS3ST3A1Q9Y663 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HS3ST3A1Q9Y663 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.13■□□□□ 0.97
HS3ST3A1Q9Y663 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HS3ST3A1Q9Y663 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
HS3ST3A1Q9Y663 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HS3ST3A1Q9Y663 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.13■□□□□ 0.97
HS3ST3A1Q9Y663 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
HS3ST3A1Q9Y663 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
HS3ST3A1Q9Y663 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
HS3ST3A1Q9Y663 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.13■□□□□ 0.97
HS3ST3A1Q9Y663 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HS3ST3A1Q9Y663 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.13■□□□□ 0.97
HS3ST3A1Q9Y663 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
HS3ST3A1Q9Y663 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
HS3ST3A1Q9Y663 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HS3ST3A1Q9Y663 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.13■□□□□ 0.97
HS3ST3A1Q9Y663 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
HS3ST3A1Q9Y663 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HS3ST3A1Q9Y663 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HS3ST3A1Q9Y663 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
HS3ST3A1Q9Y663 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.12■□□□□ 0.97
HS3ST3A1Q9Y663 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HS3ST3A1Q9Y663 AC007322.1-201ENST00000426983 750 ntBASIC21.12■□□□□ 0.97
HS3ST3A1Q9Y663 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.12■□□□□ 0.97
HS3ST3A1Q9Y663 SLC7A5P1-201ENST00000568957 537 ntBASIC21.12■□□□□ 0.97
HS3ST3A1Q9Y663 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
HS3ST3A1Q9Y663 AC104771.1-201ENST00000603335 964 ntBASIC21.12■□□□□ 0.97
HS3ST3A1Q9Y663 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HS3ST3A1Q9Y663 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HS3ST3A1Q9Y663 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
HS3ST3A1Q9Y663 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.12■□□□□ 0.97
HS3ST3A1Q9Y663 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HS3ST3A1Q9Y663 AC139530.1-201ENST00000575312 1977 ntBASIC21.12■□□□□ 0.97
HS3ST3A1Q9Y663 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HS3ST3A1Q9Y663 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
HS3ST3A1Q9Y663 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
HS3ST3A1Q9Y663 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.11■□□□□ 0.97
HS3ST3A1Q9Y663 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
HS3ST3A1Q9Y663 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HS3ST3A1Q9Y663 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
HS3ST3A1Q9Y663 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HS3ST3A1Q9Y663 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.11■□□□□ 0.97
HS3ST3A1Q9Y663 MIR663A-201ENST00000385250 93 ntBASIC21.11■□□□□ 0.97
HS3ST3A1Q9Y663 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HS3ST3A1Q9Y663 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.11■□□□□ 0.97
HS3ST3A1Q9Y663 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HS3ST3A1Q9Y663 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.11■□□□□ 0.97
HS3ST3A1Q9Y663 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.11■□□□□ 0.97
HS3ST3A1Q9Y663 AL109923.1-201ENST00000618799 583 ntBASIC21.11■□□□□ 0.97
HS3ST3A1Q9Y663 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HS3ST3A1Q9Y663 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HS3ST3A1Q9Y663 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
HS3ST3A1Q9Y663 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HS3ST3A1Q9Y663 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
HS3ST3A1Q9Y663 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HS3ST3A1Q9Y663 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HS3ST3A1Q9Y663 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HS3ST3A1Q9Y663 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HS3ST3A1Q9Y663 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HS3ST3A1Q9Y663 GPX1P1-201ENST00000388829 606 ntBASIC21.1■□□□□ 0.97
HS3ST3A1Q9Y663 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.1■□□□□ 0.97
HS3ST3A1Q9Y663 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.1■□□□□ 0.97
HS3ST3A1Q9Y663 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.1■□□□□ 0.97
HS3ST3A1Q9Y663 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
HS3ST3A1Q9Y663 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HS3ST3A1Q9Y663 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.1■□□□□ 0.97
HS3ST3A1Q9Y663 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HS3ST3A1Q9Y663 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HS3ST3A1Q9Y663 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HS3ST3A1Q9Y663 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.09■□□□□ 0.97
HS3ST3A1Q9Y663 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HS3ST3A1Q9Y663 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms