Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.09■□□□□ 0.81
CLDN16Q9Y5I7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.09■□□□□ 0.81
CLDN16Q9Y5I7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN16Q9Y5I7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CLDN16Q9Y5I7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN16Q9Y5I7 AC026471.6-201ENST00000622954 1905 ntBASIC20.09■□□□□ 0.81
CLDN16Q9Y5I7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN16Q9Y5I7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN16Q9Y5I7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN16Q9Y5I7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CLDN16Q9Y5I7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.08■□□□□ 0.81
CLDN16Q9Y5I7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.08■□□□□ 0.81
CLDN16Q9Y5I7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.08■□□□□ 0.81
CLDN16Q9Y5I7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CLDN16Q9Y5I7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN16Q9Y5I7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
CLDN16Q9Y5I7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN16Q9Y5I7 EP400NL-214ENST00000641289 2402 ntBASIC20.08■□□□□ 0.8
CLDN16Q9Y5I7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.08■□□□□ 0.8
CLDN16Q9Y5I7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN16Q9Y5I7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN16Q9Y5I7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN16Q9Y5I7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN16Q9Y5I7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN16Q9Y5I7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN16Q9Y5I7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN16Q9Y5I7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN16Q9Y5I7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN16Q9Y5I7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.07■□□□□ 0.8
CLDN16Q9Y5I7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.07■□□□□ 0.8
CLDN16Q9Y5I7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CLDN16Q9Y5I7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.07■□□□□ 0.8
CLDN16Q9Y5I7 AC034268.1-201ENST00000441047 882 ntBASIC20.07■□□□□ 0.8
CLDN16Q9Y5I7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN16Q9Y5I7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN16Q9Y5I7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.07■□□□□ 0.8
CLDN16Q9Y5I7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.07■□□□□ 0.8
CLDN16Q9Y5I7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN16Q9Y5I7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.07■□□□□ 0.8
CLDN16Q9Y5I7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN16Q9Y5I7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN16Q9Y5I7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN16Q9Y5I7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN16Q9Y5I7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN16Q9Y5I7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN16Q9Y5I7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN16Q9Y5I7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN16Q9Y5I7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CLDN16Q9Y5I7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.06■□□□□ 0.8
CLDN16Q9Y5I7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CLDN16Q9Y5I7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.06■□□□□ 0.8
CLDN16Q9Y5I7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.06■□□□□ 0.8
CLDN16Q9Y5I7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.06■□□□□ 0.8
CLDN16Q9Y5I7 MIR5787-201ENST00000611784 55 ntBASIC20.06■□□□□ 0.8
CLDN16Q9Y5I7 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.06■□□□□ 0.8
CLDN16Q9Y5I7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.06■□□□□ 0.8
CLDN16Q9Y5I7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN16Q9Y5I7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.05■□□□□ 0.8
CLDN16Q9Y5I7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN16Q9Y5I7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN16Q9Y5I7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN16Q9Y5I7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.05■□□□□ 0.8
CLDN16Q9Y5I7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.05■□□□□ 0.8
CLDN16Q9Y5I7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN16Q9Y5I7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN16Q9Y5I7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN16Q9Y5I7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN16Q9Y5I7 FAM99A-202ENST00000538190 1989 ntBASIC20.04■□□□□ 0.8
CLDN16Q9Y5I7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN16Q9Y5I7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
CLDN16Q9Y5I7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN16Q9Y5I7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN16Q9Y5I7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.04■□□□□ 0.8
CLDN16Q9Y5I7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CLDN16Q9Y5I7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.04■□□□□ 0.8
CLDN16Q9Y5I7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.04■□□□□ 0.8
CLDN16Q9Y5I7 AL162430.1-201ENST00000480705 870 ntBASIC20.04■□□□□ 0.8
CLDN16Q9Y5I7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.04■□□□□ 0.8
CLDN16Q9Y5I7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CLDN16Q9Y5I7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN16Q9Y5I7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN16Q9Y5I7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN16Q9Y5I7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN16Q9Y5I7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CLDN16Q9Y5I7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.03■□□□□ 0.8
CLDN16Q9Y5I7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN16Q9Y5I7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.03■□□□□ 0.8
CLDN16Q9Y5I7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.03■□□□□ 0.8
CLDN16Q9Y5I7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN16Q9Y5I7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN16Q9Y5I7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN16Q9Y5I7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN16Q9Y5I7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.03■□□□□ 0.8
CLDN16Q9Y5I7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN16Q9Y5I7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN16Q9Y5I7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.03■□□□□ 0.8
CLDN16Q9Y5I7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.03■□□□□ 0.8
CLDN16Q9Y5I7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN16Q9Y5I7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN16Q9Y5I7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms