Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA7Q9Y5G6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA7Q9Y5G6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.28■■□□□ 1
PCDHGA7Q9Y5G6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA7Q9Y5G6 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA7Q9Y5G6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA7Q9Y5G6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.27■■□□□ 1
PCDHGA7Q9Y5G6 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGA7Q9Y5G6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.27■■□□□ 1
PCDHGA7Q9Y5G6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.27■■□□□ 1
PCDHGA7Q9Y5G6 AC133637.1-201ENST00000624115 1537 ntBASIC21.27■■□□□ 1
PCDHGA7Q9Y5G6 AL353803.4-201ENST00000565882 1934 ntBASIC21.27■■□□□ 1
PCDHGA7Q9Y5G6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGA7Q9Y5G6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PCDHGA7Q9Y5G6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PCDHGA7Q9Y5G6 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA7Q9Y5G6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA7Q9Y5G6 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA7Q9Y5G6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
PCDHGA7Q9Y5G6 AC004911.1-201ENST00000416316 871 ntBASIC21.26■□□□□ 0.99
PCDHGA7Q9Y5G6 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHGA7Q9Y5G6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHGA7Q9Y5G6 AL499627.2-201ENST00000606283 725 ntBASIC21.26■□□□□ 0.99
PCDHGA7Q9Y5G6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHGA7Q9Y5G6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA7Q9Y5G6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA7Q9Y5G6 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA7Q9Y5G6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA7Q9Y5G6 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
PCDHGA7Q9Y5G6 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA7Q9Y5G6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA7Q9Y5G6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PCDHGA7Q9Y5G6 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PCDHGA7Q9Y5G6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
PCDHGA7Q9Y5G6 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.25■□□□□ 0.99
PCDHGA7Q9Y5G6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHGA7Q9Y5G6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.25■□□□□ 0.99
PCDHGA7Q9Y5G6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHGA7Q9Y5G6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA7Q9Y5G6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA7Q9Y5G6 LINC02228-203ENST00000641970 1355 ntBASIC21.24■□□□□ 0.99
PCDHGA7Q9Y5G6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA7Q9Y5G6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDHGA7Q9Y5G6 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.24■□□□□ 0.99
PCDHGA7Q9Y5G6 TERF1P2-201ENST00000583350 1212 ntBASIC21.24■□□□□ 0.99
PCDHGA7Q9Y5G6 NTF6G-201ENST00000591094 616 ntBASIC21.24■□□□□ 0.99
PCDHGA7Q9Y5G6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA7Q9Y5G6 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
PCDHGA7Q9Y5G6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDHGA7Q9Y5G6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDHGA7Q9Y5G6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
PCDHGA7Q9Y5G6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA7Q9Y5G6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA7Q9Y5G6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA7Q9Y5G6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA7Q9Y5G6 ID1-201ENST00000376105 1233 ntBASIC21.23■□□□□ 0.99
PCDHGA7Q9Y5G6 OR2I1P-207ENST00000453522 948 ntBASIC21.23■□□□□ 0.99
PCDHGA7Q9Y5G6 KRT18P14-201ENST00000534205 1250 ntBASIC21.23■□□□□ 0.99
PCDHGA7Q9Y5G6 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDHGA7Q9Y5G6 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA7Q9Y5G6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
PCDHGA7Q9Y5G6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA7Q9Y5G6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDHGA7Q9Y5G6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA7Q9Y5G6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDHGA7Q9Y5G6 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA7Q9Y5G6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA7Q9Y5G6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
PCDHGA7Q9Y5G6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.22■□□□□ 0.99
PCDHGA7Q9Y5G6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA7Q9Y5G6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDHGA7Q9Y5G6 AC087742.1-201ENST00000575880 1738 ntBASIC21.22■□□□□ 0.99
PCDHGA7Q9Y5G6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA7Q9Y5G6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA7Q9Y5G6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.22■□□□□ 0.99
PCDHGA7Q9Y5G6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.22■□□□□ 0.99
PCDHGA7Q9Y5G6 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA7Q9Y5G6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA7Q9Y5G6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA7Q9Y5G6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA7Q9Y5G6 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA7Q9Y5G6 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDHGA7Q9Y5G6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PCDHGA7Q9Y5G6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGA7Q9Y5G6 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
PCDHGA7Q9Y5G6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDHGA7Q9Y5G6 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.21■□□□□ 0.99
PCDHGA7Q9Y5G6 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGA7Q9Y5G6 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDHGA7Q9Y5G6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDHGA7Q9Y5G6 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGA7Q9Y5G6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGA7Q9Y5G6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGA7Q9Y5G6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGA7Q9Y5G6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGA7Q9Y5G6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGA7Q9Y5G6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.2■□□□□ 0.98
PCDHGA7Q9Y5G6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGA7Q9Y5G6 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDHGA7Q9Y5G6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms