Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB11Q9Y5F2 OXCT2P1-201ENST00000447263 1535 ntBASIC21.03■□□□□ 0.96
PCDHB11Q9Y5F2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB11Q9Y5F2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB11Q9Y5F2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PCDHB11Q9Y5F2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
PCDHB11Q9Y5F2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PCDHB11Q9Y5F2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.02■□□□□ 0.96
PCDHB11Q9Y5F2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.02■□□□□ 0.96
PCDHB11Q9Y5F2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB11Q9Y5F2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB11Q9Y5F2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB11Q9Y5F2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB11Q9Y5F2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB11Q9Y5F2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.02■□□□□ 0.96
PCDHB11Q9Y5F2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.02■□□□□ 0.96
PCDHB11Q9Y5F2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
PCDHB11Q9Y5F2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB11Q9Y5F2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
PCDHB11Q9Y5F2 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB11Q9Y5F2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
PCDHB11Q9Y5F2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDHB11Q9Y5F2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.01■□□□□ 0.95
PCDHB11Q9Y5F2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDHB11Q9Y5F2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.01■□□□□ 0.95
PCDHB11Q9Y5F2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDHB11Q9Y5F2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB11Q9Y5F2 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB11Q9Y5F2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PCDHB11Q9Y5F2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB11Q9Y5F2 CLDN5-201ENST00000403084 2357 ntBASIC21.01■□□□□ 0.95
PCDHB11Q9Y5F2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB11Q9Y5F2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB11Q9Y5F2 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB11Q9Y5F2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
PCDHB11Q9Y5F2 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB11Q9Y5F2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB11Q9Y5F2 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB11Q9Y5F2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB11Q9Y5F2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB11Q9Y5F2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB11Q9Y5F2 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB11Q9Y5F2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB11Q9Y5F2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB11Q9Y5F2 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB11Q9Y5F2 AC079089.2-201ENST00000531211 1277 ntBASIC21■□□□□ 0.95
PCDHB11Q9Y5F2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21■□□□□ 0.95
PCDHB11Q9Y5F2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21■□□□□ 0.95
PCDHB11Q9Y5F2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PCDHB11Q9Y5F2 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PCDHB11Q9Y5F2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDHB11Q9Y5F2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB11Q9Y5F2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB11Q9Y5F2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB11Q9Y5F2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB11Q9Y5F2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB11Q9Y5F2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDHB11Q9Y5F2 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB11Q9Y5F2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB11Q9Y5F2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB11Q9Y5F2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.99■□□□□ 0.95
PCDHB11Q9Y5F2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.99■□□□□ 0.95
PCDHB11Q9Y5F2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB11Q9Y5F2 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB11Q9Y5F2 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB11Q9Y5F2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB11Q9Y5F2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
PCDHB11Q9Y5F2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB11Q9Y5F2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDHB11Q9Y5F2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.99■□□□□ 0.95
PCDHB11Q9Y5F2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
PCDHB11Q9Y5F2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDHB11Q9Y5F2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB11Q9Y5F2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB11Q9Y5F2 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB11Q9Y5F2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB11Q9Y5F2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB11Q9Y5F2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB11Q9Y5F2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB11Q9Y5F2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PCDHB11Q9Y5F2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.98■□□□□ 0.95
PCDHB11Q9Y5F2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB11Q9Y5F2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
PCDHB11Q9Y5F2 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PCDHB11Q9Y5F2 AC137767.1-201ENST00000602918 1920 ntBASIC20.98■□□□□ 0.95
PCDHB11Q9Y5F2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDHB11Q9Y5F2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB11Q9Y5F2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDHB11Q9Y5F2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
PCDHB11Q9Y5F2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PCDHB11Q9Y5F2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB11Q9Y5F2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB11Q9Y5F2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB11Q9Y5F2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB11Q9Y5F2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB11Q9Y5F2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB11Q9Y5F2 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB11Q9Y5F2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDHB11Q9Y5F2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
PCDHB11Q9Y5F2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms