Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC28.23■■■□□ 2.11
SPG7Q9UQ90 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC28.23■■■□□ 2.11
SPG7Q9UQ90 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC28.23■■■□□ 2.11
SPG7Q9UQ90 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC28.23■■■□□ 2.11
SPG7Q9UQ90 PFKL-212ENST00000628044 129 ntTSL 3 BASIC28.23■■■□□ 2.11
SPG7Q9UQ90 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SPG7Q9UQ90 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
SPG7Q9UQ90 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
SPG7Q9UQ90 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
SPG7Q9UQ90 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC28.22■■■□□ 2.11
SPG7Q9UQ90 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
SPG7Q9UQ90 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC28.22■■■□□ 2.11
SPG7Q9UQ90 AF201337.1-201ENST00000520239 748 ntBASIC28.22■■■□□ 2.11
SPG7Q9UQ90 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC28.22■■■□□ 2.11
SPG7Q9UQ90 KRT18P6-201ENST00000555540 1265 ntBASIC28.22■■■□□ 2.11
SPG7Q9UQ90 AC133552.2-202ENST00000575694 574 ntBASIC28.22■■■□□ 2.11
SPG7Q9UQ90 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC28.22■■■□□ 2.11
SPG7Q9UQ90 AC093323.1-202ENST00000635031 2045 ntBASIC28.22■■■□□ 2.11
SPG7Q9UQ90 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
SPG7Q9UQ90 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC28.22■■■□□ 2.11
SPG7Q9UQ90 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
SPG7Q9UQ90 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC28.21■■■□□ 2.11
SPG7Q9UQ90 EEF1DP3-203ENST00000566025 782 ntBASIC28.21■■■□□ 2.11
SPG7Q9UQ90 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
SPG7Q9UQ90 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SPG7Q9UQ90 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SPG7Q9UQ90 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC28.2■■■□□ 2.11
SPG7Q9UQ90 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
SPG7Q9UQ90 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
SPG7Q9UQ90 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
SPG7Q9UQ90 APTR-203ENST00000430801 583 ntTSL 5 BASIC28.2■■■□□ 2.1
SPG7Q9UQ90 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC28.2■■■□□ 2.1
SPG7Q9UQ90 KLF13-207ENST00000560473 489 ntTSL 3 BASIC28.2■■■□□ 2.1
SPG7Q9UQ90 SLC7A5P1-201ENST00000568957 537 ntBASIC28.2■■■□□ 2.1
SPG7Q9UQ90 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SPG7Q9UQ90 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
SPG7Q9UQ90 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SPG7Q9UQ90 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
SPG7Q9UQ90 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC28.19■■■□□ 2.1
SPG7Q9UQ90 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
SPG7Q9UQ90 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SPG7Q9UQ90 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
SPG7Q9UQ90 RGMA-211ENST00000557420 989 ntTSL 3 BASIC28.19■■■□□ 2.1
SPG7Q9UQ90 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SPG7Q9UQ90 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
SPG7Q9UQ90 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
SPG7Q9UQ90 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SPG7Q9UQ90 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
SPG7Q9UQ90 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC28.18■■■□□ 2.1
SPG7Q9UQ90 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
SPG7Q9UQ90 AC105036.2-201ENST00000569468 176 ntBASIC28.18■■■□□ 2.1
SPG7Q9UQ90 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SPG7Q9UQ90 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC28.18■■■□□ 2.1
SPG7Q9UQ90 AC053503.5-201ENST00000601508 636 ntBASIC28.18■■■□□ 2.1
SPG7Q9UQ90 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC28.18■■■□□ 2.1
SPG7Q9UQ90 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SPG7Q9UQ90 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SPG7Q9UQ90 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC28.18■■■□□ 2.1
SPG7Q9UQ90 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC28.17■■■□□ 2.1
SPG7Q9UQ90 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC28.17■■■□□ 2.1
SPG7Q9UQ90 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC28.17■■■□□ 2.1
SPG7Q9UQ90 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SPG7Q9UQ90 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
SPG7Q9UQ90 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC28.17■■■□□ 2.1
SPG7Q9UQ90 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
SPG7Q9UQ90 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SPG7Q9UQ90 TSPY20P-201ENST00000450910 630 ntBASIC28.17■■■□□ 2.1
SPG7Q9UQ90 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SPG7Q9UQ90 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC28.17■■■□□ 2.1
SPG7Q9UQ90 AC013268.1-206ENST00000638368 961 ntBASIC28.17■■■□□ 2.1
SPG7Q9UQ90 AC112229.1-201ENST00000639295 961 ntBASIC28.17■■■□□ 2.1
SPG7Q9UQ90 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC28.17■■■□□ 2.1
SPG7Q9UQ90 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SPG7Q9UQ90 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SPG7Q9UQ90 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC28.17■■■□□ 2.1
SPG7Q9UQ90 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SPG7Q9UQ90 AP006587.3-201ENST00000525742 1516 ntBASIC28.17■■■□□ 2.1
SPG7Q9UQ90 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC28.16■■■□□ 2.1
SPG7Q9UQ90 AC069152.1-201ENST00000438030 544 ntBASIC28.16■■■□□ 2.1
SPG7Q9UQ90 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC28.16■■■□□ 2.1
SPG7Q9UQ90 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC28.16■■■□□ 2.1
SPG7Q9UQ90 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC28.16■■■□□ 2.1
SPG7Q9UQ90 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
SPG7Q9UQ90 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
SPG7Q9UQ90 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
SPG7Q9UQ90 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SPG7Q9UQ90 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
SPG7Q9UQ90 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
SPG7Q9UQ90 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
SPG7Q9UQ90 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC28.15■■■□□ 2.1
SPG7Q9UQ90 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SPG7Q9UQ90 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC28.15■■■□□ 2.1
SPG7Q9UQ90 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SPG7Q9UQ90 NAA20-201ENST00000310450 920 ntTSL 2 BASIC28.15■■■□□ 2.1
SPG7Q9UQ90 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC28.15■■■□□ 2.1
SPG7Q9UQ90 UQCRFS1P1-201ENST00000435169 820 ntBASIC28.15■■■□□ 2.1
SPG7Q9UQ90 TERF1P5-201ENST00000477545 1207 ntBASIC28.15■■■□□ 2.1
SPG7Q9UQ90 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
SPG7Q9UQ90 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
SPG7Q9UQ90 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC28.15■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms