Protein–RNA interactions for Protein: Q9UPU9

SAMD4A, Protein Smaug homolog 1, humanhuman

Known RBP Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4AQ9UPU9 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SAMD4AQ9UPU9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SAMD4AQ9UPU9 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SAMD4AQ9UPU9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SAMD4AQ9UPU9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SAMD4AQ9UPU9 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SAMD4AQ9UPU9 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SAMD4AQ9UPU9 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SAMD4AQ9UPU9 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SAMD4AQ9UPU9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SAMD4AQ9UPU9 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.05■□□□□ 0.8
SAMD4AQ9UPU9 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SAMD4AQ9UPU9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.05■□□□□ 0.8
SAMD4AQ9UPU9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
SAMD4AQ9UPU9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SAMD4AQ9UPU9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SAMD4AQ9UPU9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SAMD4AQ9UPU9 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SAMD4AQ9UPU9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.05■□□□□ 0.8
SAMD4AQ9UPU9 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
SAMD4AQ9UPU9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SAMD4AQ9UPU9 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SAMD4AQ9UPU9 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.04■□□□□ 0.8
SAMD4AQ9UPU9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.04■□□□□ 0.8
SAMD4AQ9UPU9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SAMD4AQ9UPU9 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.04■□□□□ 0.8
SAMD4AQ9UPU9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.04■□□□□ 0.8
SAMD4AQ9UPU9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.04■□□□□ 0.8
SAMD4AQ9UPU9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SAMD4AQ9UPU9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SAMD4AQ9UPU9 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.04■□□□□ 0.8
SAMD4AQ9UPU9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SAMD4AQ9UPU9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SAMD4AQ9UPU9 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SAMD4AQ9UPU9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SAMD4AQ9UPU9 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.03■□□□□ 0.8
SAMD4AQ9UPU9 OR7E47P-201ENST00000546390 1422 ntBASIC20.03■□□□□ 0.8
SAMD4AQ9UPU9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.03■□□□□ 0.8
SAMD4AQ9UPU9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.03■□□□□ 0.8
SAMD4AQ9UPU9 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SAMD4AQ9UPU9 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SAMD4AQ9UPU9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SAMD4AQ9UPU9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.03■□□□□ 0.8
SAMD4AQ9UPU9 Z92544.1-202ENST00000571933 1220 ntBASIC20.03■□□□□ 0.8
SAMD4AQ9UPU9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SAMD4AQ9UPU9 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SAMD4AQ9UPU9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.03■□□□□ 0.8
SAMD4AQ9UPU9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.03■□□□□ 0.8
SAMD4AQ9UPU9 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SAMD4AQ9UPU9 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SAMD4AQ9UPU9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.02■□□□□ 0.8
SAMD4AQ9UPU9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.02■□□□□ 0.8
SAMD4AQ9UPU9 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.02■□□□□ 0.8
SAMD4AQ9UPU9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SAMD4AQ9UPU9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SAMD4AQ9UPU9 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SAMD4AQ9UPU9 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.02■□□□□ 0.8
SAMD4AQ9UPU9 AC026471.6-201ENST00000622954 1905 ntBASIC20.02■□□□□ 0.79
SAMD4AQ9UPU9 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.02■□□□□ 0.79
SAMD4AQ9UPU9 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SAMD4AQ9UPU9 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
SAMD4AQ9UPU9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SAMD4AQ9UPU9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SAMD4AQ9UPU9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.01■□□□□ 0.79
SAMD4AQ9UPU9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SAMD4AQ9UPU9 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SAMD4AQ9UPU9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SAMD4AQ9UPU9 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.01■□□□□ 0.79
SAMD4AQ9UPU9 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SAMD4AQ9UPU9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SAMD4AQ9UPU9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.01■□□□□ 0.79
SAMD4AQ9UPU9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SAMD4AQ9UPU9 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SAMD4AQ9UPU9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20■□□□□ 0.79
SAMD4AQ9UPU9 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SAMD4AQ9UPU9 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20■□□□□ 0.79
SAMD4AQ9UPU9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SAMD4AQ9UPU9 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20■□□□□ 0.79
SAMD4AQ9UPU9 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SAMD4AQ9UPU9 AC010997.5-201ENST00000609182 354 ntBASIC20■□□□□ 0.79
SAMD4AQ9UPU9 AC241377.3-202ENST00000626088 1088 ntBASIC20■□□□□ 0.79
SAMD4AQ9UPU9 AC241585.3-202ENST00000628937 1088 ntBASIC20■□□□□ 0.79
SAMD4AQ9UPU9 AC245100.8-202ENST00000629247 1058 ntBASIC20■□□□□ 0.79
SAMD4AQ9UPU9 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SAMD4AQ9UPU9 OXCT2P1-201ENST00000447263 1535 ntBASIC20■□□□□ 0.79
SAMD4AQ9UPU9 LINC01521-201ENST00000504184 1943 ntBASIC20■□□□□ 0.79
SAMD4AQ9UPU9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
SAMD4AQ9UPU9 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SAMD4AQ9UPU9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SAMD4AQ9UPU9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.99■□□□□ 0.79
SAMD4AQ9UPU9 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SAMD4AQ9UPU9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.99■□□□□ 0.79
SAMD4AQ9UPU9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
SAMD4AQ9UPU9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.99■□□□□ 0.79
SAMD4AQ9UPU9 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SAMD4AQ9UPU9 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SAMD4AQ9UPU9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SAMD4AQ9UPU9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SAMD4AQ9UPU9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SAMD4AQ9UPU9 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms