Protein–RNA interactions for Protein: Q9UNH7

SNX6, Sorting nexin-6, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6Q9UNH7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNX6Q9UNH7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SNX6Q9UNH7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
SNX6Q9UNH7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.75■□□□□ 0.91
SNX6Q9UNH7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNX6Q9UNH7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SNX6Q9UNH7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNX6Q9UNH7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNX6Q9UNH7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNX6Q9UNH7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
SNX6Q9UNH7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SNX6Q9UNH7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.74■□□□□ 0.91
SNX6Q9UNH7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.74■□□□□ 0.91
SNX6Q9UNH7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.74■□□□□ 0.91
SNX6Q9UNH7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNX6Q9UNH7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.74■□□□□ 0.91
SNX6Q9UNH7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNX6Q9UNH7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNX6Q9UNH7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.73■□□□□ 0.91
SNX6Q9UNH7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNX6Q9UNH7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
SNX6Q9UNH7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.73■□□□□ 0.91
SNX6Q9UNH7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SNX6Q9UNH7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SNX6Q9UNH7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.73■□□□□ 0.91
SNX6Q9UNH7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNX6Q9UNH7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SNX6Q9UNH7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.73■□□□□ 0.91
SNX6Q9UNH7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.72■□□□□ 0.91
SNX6Q9UNH7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SNX6Q9UNH7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNX6Q9UNH7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SNX6Q9UNH7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SNX6Q9UNH7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNX6Q9UNH7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SNX6Q9UNH7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.72■□□□□ 0.91
SNX6Q9UNH7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.72■□□□□ 0.91
SNX6Q9UNH7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.72■□□□□ 0.91
SNX6Q9UNH7 AC131212.1-201ENST00000613771 668 ntBASIC20.72■□□□□ 0.91
SNX6Q9UNH7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNX6Q9UNH7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SNX6Q9UNH7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNX6Q9UNH7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.72■□□□□ 0.91
SNX6Q9UNH7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNX6Q9UNH7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
SNX6Q9UNH7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.72■□□□□ 0.91
SNX6Q9UNH7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX6Q9UNH7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SNX6Q9UNH7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
SNX6Q9UNH7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SNX6Q9UNH7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SNX6Q9UNH7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.71■□□□□ 0.91
SNX6Q9UNH7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX6Q9UNH7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX6Q9UNH7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SNX6Q9UNH7 AL034346.1-201ENST00000568244 1277 ntBASIC20.71■□□□□ 0.91
SNX6Q9UNH7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX6Q9UNH7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SNX6Q9UNH7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX6Q9UNH7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SNX6Q9UNH7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.71■□□□□ 0.91
SNX6Q9UNH7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SNX6Q9UNH7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SNX6Q9UNH7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.7■□□□□ 0.91
SNX6Q9UNH7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX6Q9UNH7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX6Q9UNH7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
SNX6Q9UNH7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.7■□□□□ 0.9
SNX6Q9UNH7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.7■□□□□ 0.9
SNX6Q9UNH7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SNX6Q9UNH7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.7■□□□□ 0.9
SNX6Q9UNH7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
SNX6Q9UNH7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.7■□□□□ 0.9
SNX6Q9UNH7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX6Q9UNH7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX6Q9UNH7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX6Q9UNH7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.7■□□□□ 0.9
SNX6Q9UNH7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SNX6Q9UNH7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SNX6Q9UNH7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.7■□□□□ 0.9
SNX6Q9UNH7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX6Q9UNH7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SNX6Q9UNH7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX6Q9UNH7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.7■□□□□ 0.9
SNX6Q9UNH7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.69■□□□□ 0.9
SNX6Q9UNH7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX6Q9UNH7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SNX6Q9UNH7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX6Q9UNH7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.69■□□□□ 0.9
SNX6Q9UNH7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SNX6Q9UNH7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.69■□□□□ 0.9
SNX6Q9UNH7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.69■□□□□ 0.9
SNX6Q9UNH7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX6Q9UNH7 UNC93B3-201ENST00000308076 687 ntBASIC20.69■□□□□ 0.9
SNX6Q9UNH7 AC104564.3-201ENST00000582367 638 ntBASIC20.69■□□□□ 0.9
SNX6Q9UNH7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.69■□□□□ 0.9
SNX6Q9UNH7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX6Q9UNH7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.68■□□□□ 0.9
SNX6Q9UNH7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNX6Q9UNH7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms