Protein–RNA interactions for Protein: Q9UHC7

MKRN1, E3 ubiquitin-protein ligase makorin-1, humanhuman

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1Q9UHC7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
MKRN1Q9UHC7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
MKRN1Q9UHC7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC26.14■■□□□ 1.78
MKRN1Q9UHC7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC26.14■■□□□ 1.78
MKRN1Q9UHC7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
MKRN1Q9UHC7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
MKRN1Q9UHC7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC26.14■■□□□ 1.78
MKRN1Q9UHC7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC26.14■■□□□ 1.78
MKRN1Q9UHC7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
MKRN1Q9UHC7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC26.13■■□□□ 1.77
MKRN1Q9UHC7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
MKRN1Q9UHC7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC26.13■■□□□ 1.77
MKRN1Q9UHC7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC26.13■■□□□ 1.77
MKRN1Q9UHC7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC26.13■■□□□ 1.77
MKRN1Q9UHC7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC26.13■■□□□ 1.77
MKRN1Q9UHC7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
MKRN1Q9UHC7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
MKRN1Q9UHC7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
MKRN1Q9UHC7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
MKRN1Q9UHC7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC26.12■■□□□ 1.77
MKRN1Q9UHC7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC26.12■■□□□ 1.77
MKRN1Q9UHC7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC26.12■■□□□ 1.77
MKRN1Q9UHC7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
MKRN1Q9UHC7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
MKRN1Q9UHC7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
MKRN1Q9UHC7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
MKRN1Q9UHC7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
MKRN1Q9UHC7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
MKRN1Q9UHC7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
MKRN1Q9UHC7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
MKRN1Q9UHC7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC26.11■■□□□ 1.77
MKRN1Q9UHC7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC26.11■■□□□ 1.77
MKRN1Q9UHC7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
MKRN1Q9UHC7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
MKRN1Q9UHC7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
MKRN1Q9UHC7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC26.1■■□□□ 1.77
MKRN1Q9UHC7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
MKRN1Q9UHC7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
MKRN1Q9UHC7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
MKRN1Q9UHC7 MAX-217ENST00000557277 728 ntTSL 3 BASIC26.1■■□□□ 1.77
MKRN1Q9UHC7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC26.1■■□□□ 1.77
MKRN1Q9UHC7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
MKRN1Q9UHC7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC26.1■■□□□ 1.77
MKRN1Q9UHC7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
MKRN1Q9UHC7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
MKRN1Q9UHC7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
MKRN1Q9UHC7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
MKRN1Q9UHC7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
MKRN1Q9UHC7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC26.1■■□□□ 1.77
MKRN1Q9UHC7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC26.1■■□□□ 1.77
MKRN1Q9UHC7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
MKRN1Q9UHC7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
MKRN1Q9UHC7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
MKRN1Q9UHC7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC26.09■■□□□ 1.77
MKRN1Q9UHC7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC26.09■■□□□ 1.77
MKRN1Q9UHC7 AC010141.3-201ENST00000456659 717 ntBASIC26.09■■□□□ 1.77
MKRN1Q9UHC7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC26.09■■□□□ 1.77
MKRN1Q9UHC7 AC079140.4-201ENST00000507448 529 ntBASIC26.09■■□□□ 1.77
MKRN1Q9UHC7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC26.09■■□□□ 1.77
MKRN1Q9UHC7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC26.09■■□□□ 1.77
MKRN1Q9UHC7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC26.09■■□□□ 1.77
MKRN1Q9UHC7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
MKRN1Q9UHC7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC26.09■■□□□ 1.77
MKRN1Q9UHC7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC26.09■■□□□ 1.77
MKRN1Q9UHC7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
MKRN1Q9UHC7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC26.08■■□□□ 1.77
MKRN1Q9UHC7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
MKRN1Q9UHC7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC26.08■■□□□ 1.77
MKRN1Q9UHC7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
MKRN1Q9UHC7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC26.08■■□□□ 1.77
MKRN1Q9UHC7 AC010331.1-201ENST00000611423 582 ntBASIC26.08■■□□□ 1.77
MKRN1Q9UHC7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
MKRN1Q9UHC7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC26.07■■□□□ 1.76
MKRN1Q9UHC7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
MKRN1Q9UHC7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
MKRN1Q9UHC7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
MKRN1Q9UHC7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
MKRN1Q9UHC7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
MKRN1Q9UHC7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC26.07■■□□□ 1.76
MKRN1Q9UHC7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
MKRN1Q9UHC7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
MKRN1Q9UHC7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
MKRN1Q9UHC7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC26.07■■□□□ 1.76
MKRN1Q9UHC7 ECEL1P3-201ENST00000427961 737 ntBASIC26.07■■□□□ 1.76
MKRN1Q9UHC7 RARRES2P4-201ENST00000514074 484 ntBASIC26.07■■□□□ 1.76
MKRN1Q9UHC7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
MKRN1Q9UHC7 AC142381.4-202ENST00000563973 229 ntBASIC26.07■■□□□ 1.76
MKRN1Q9UHC7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
MKRN1Q9UHC7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
MKRN1Q9UHC7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
MKRN1Q9UHC7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
MKRN1Q9UHC7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC26.06■■□□□ 1.76
MKRN1Q9UHC7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC26.06■■□□□ 1.76
MKRN1Q9UHC7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC26.06■■□□□ 1.76
MKRN1Q9UHC7 MIR4758-201ENST00000577688 71 ntBASIC26.06■■□□□ 1.76
MKRN1Q9UHC7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
MKRN1Q9UHC7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC26.06■■□□□ 1.76
MKRN1Q9UHC7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC26.05■■□□□ 1.76
MKRN1Q9UHC7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
MKRN1Q9UHC7 OXCT2P1-201ENST00000447263 1535 ntBASIC26.05■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms