Protein–RNA interactions for Protein: Q9UBR1

UPB1, Beta-ureidopropionase, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPB1Q9UBR1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
UPB1Q9UBR1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
UPB1Q9UBR1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UPB1Q9UBR1 IRS3P-201ENST00000223076 1006 ntBASIC19.28■□□□□ 0.68
UPB1Q9UBR1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.28■□□□□ 0.68
UPB1Q9UBR1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
UPB1Q9UBR1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.28■□□□□ 0.68
UPB1Q9UBR1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.28■□□□□ 0.68
UPB1Q9UBR1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.28■□□□□ 0.68
UPB1Q9UBR1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.28■□□□□ 0.68
UPB1Q9UBR1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UPB1Q9UBR1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
UPB1Q9UBR1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPB1Q9UBR1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UPB1Q9UBR1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPB1Q9UBR1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.27■□□□□ 0.68
UPB1Q9UBR1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPB1Q9UBR1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPB1Q9UBR1 AL024507.2-201ENST00000606070 2574 ntBASIC19.27■□□□□ 0.68
UPB1Q9UBR1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UPB1Q9UBR1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.27■□□□□ 0.68
UPB1Q9UBR1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPB1Q9UBR1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.27■□□□□ 0.68
UPB1Q9UBR1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UPB1Q9UBR1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UPB1Q9UBR1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UPB1Q9UBR1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
UPB1Q9UBR1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.27■□□□□ 0.68
UPB1Q9UBR1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPB1Q9UBR1 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.27■□□□□ 0.67
UPB1Q9UBR1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.26■□□□□ 0.67
UPB1Q9UBR1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPB1Q9UBR1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPB1Q9UBR1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPB1Q9UBR1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
UPB1Q9UBR1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPB1Q9UBR1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPB1Q9UBR1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
UPB1Q9UBR1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPB1Q9UBR1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.26■□□□□ 0.67
UPB1Q9UBR1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
UPB1Q9UBR1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.26■□□□□ 0.67
UPB1Q9UBR1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
UPB1Q9UBR1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPB1Q9UBR1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPB1Q9UBR1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.25■□□□□ 0.67
UPB1Q9UBR1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
UPB1Q9UBR1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPB1Q9UBR1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UPB1Q9UBR1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPB1Q9UBR1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.25■□□□□ 0.67
UPB1Q9UBR1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPB1Q9UBR1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.25■□□□□ 0.67
UPB1Q9UBR1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
UPB1Q9UBR1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPB1Q9UBR1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPB1Q9UBR1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.25■□□□□ 0.67
UPB1Q9UBR1 ZNRF2P3-201ENST00000424200 374 ntBASIC19.25■□□□□ 0.67
UPB1Q9UBR1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.25■□□□□ 0.67
UPB1Q9UBR1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.25■□□□□ 0.67
UPB1Q9UBR1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.25■□□□□ 0.67
UPB1Q9UBR1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.25■□□□□ 0.67
UPB1Q9UBR1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPB1Q9UBR1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.25■□□□□ 0.67
UPB1Q9UBR1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.25■□□□□ 0.67
UPB1Q9UBR1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.25■□□□□ 0.67
UPB1Q9UBR1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPB1Q9UBR1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPB1Q9UBR1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
UPB1Q9UBR1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPB1Q9UBR1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPB1Q9UBR1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPB1Q9UBR1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPB1Q9UBR1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPB1Q9UBR1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
UPB1Q9UBR1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPB1Q9UBR1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UPB1Q9UBR1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.24■□□□□ 0.67
UPB1Q9UBR1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UPB1Q9UBR1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPB1Q9UBR1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
UPB1Q9UBR1 OXCT2P1-201ENST00000447263 1535 ntBASIC19.24■□□□□ 0.67
UPB1Q9UBR1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPB1Q9UBR1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPB1Q9UBR1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPB1Q9UBR1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPB1Q9UBR1 MIR572-201ENST00000384983 95 ntBASIC19.23■□□□□ 0.67
UPB1Q9UBR1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UPB1Q9UBR1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.23■□□□□ 0.67
UPB1Q9UBR1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPB1Q9UBR1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.23■□□□□ 0.67
UPB1Q9UBR1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.23■□□□□ 0.67
UPB1Q9UBR1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
UPB1Q9UBR1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UPB1Q9UBR1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UPB1Q9UBR1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.22■□□□□ 0.67
UPB1Q9UBR1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UPB1Q9UBR1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UPB1Q9UBR1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UPB1Q9UBR1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms