Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.51■■□□□ 1.03
CPSF2Q9P2I0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPSF2Q9P2I0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CPSF2Q9P2I0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.51■■□□□ 1.03
CPSF2Q9P2I0 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CPSF2Q9P2I0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPSF2Q9P2I0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPSF2Q9P2I0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CPSF2Q9P2I0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CPSF2Q9P2I0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CPSF2Q9P2I0 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPSF2Q9P2I0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPSF2Q9P2I0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPSF2Q9P2I0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPSF2Q9P2I0 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPSF2Q9P2I0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CPSF2Q9P2I0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.5■■□□□ 1.03
CPSF2Q9P2I0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPSF2Q9P2I0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
CPSF2Q9P2I0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CPSF2Q9P2I0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.5■■□□□ 1.03
CPSF2Q9P2I0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CPSF2Q9P2I0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CPSF2Q9P2I0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CPSF2Q9P2I0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.49■■□□□ 1.03
CPSF2Q9P2I0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
CPSF2Q9P2I0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CPSF2Q9P2I0 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CPSF2Q9P2I0 CA15P2-201ENST00000611168 834 ntBASIC21.49■■□□□ 1.03
CPSF2Q9P2I0 AL117332.1-201ENST00000622628 974 ntBASIC21.49■■□□□ 1.03
CPSF2Q9P2I0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CPSF2Q9P2I0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CPSF2Q9P2I0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPSF2Q9P2I0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.48■■□□□ 1.03
CPSF2Q9P2I0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPSF2Q9P2I0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPSF2Q9P2I0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CPSF2Q9P2I0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPSF2Q9P2I0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CPSF2Q9P2I0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPSF2Q9P2I0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPSF2Q9P2I0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPSF2Q9P2I0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPSF2Q9P2I0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.48■■□□□ 1.03
CPSF2Q9P2I0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.48■■□□□ 1.03
CPSF2Q9P2I0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.48■■□□□ 1.03
CPSF2Q9P2I0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.48■■□□□ 1.03
CPSF2Q9P2I0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.48■■□□□ 1.03
CPSF2Q9P2I0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPSF2Q9P2I0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPSF2Q9P2I0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.48■■□□□ 1.03
CPSF2Q9P2I0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CPSF2Q9P2I0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.47■■□□□ 1.03
CPSF2Q9P2I0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPSF2Q9P2I0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CPSF2Q9P2I0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPSF2Q9P2I0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPSF2Q9P2I0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.47■■□□□ 1.03
CPSF2Q9P2I0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPSF2Q9P2I0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPSF2Q9P2I0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPSF2Q9P2I0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPSF2Q9P2I0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CPSF2Q9P2I0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CPSF2Q9P2I0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CPSF2Q9P2I0 KRT16P3-201ENST00000439127 1283 ntBASIC21.47■■□□□ 1.03
CPSF2Q9P2I0 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.47■■□□□ 1.03
CPSF2Q9P2I0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.47■■□□□ 1.03
CPSF2Q9P2I0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CPSF2Q9P2I0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CPSF2Q9P2I0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPSF2Q9P2I0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CPSF2Q9P2I0 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPSF2Q9P2I0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CPSF2Q9P2I0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CPSF2Q9P2I0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPSF2Q9P2I0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPSF2Q9P2I0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.46■■□□□ 1.03
CPSF2Q9P2I0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.46■■□□□ 1.03
CPSF2Q9P2I0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.46■■□□□ 1.03
CPSF2Q9P2I0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPSF2Q9P2I0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPSF2Q9P2I0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPSF2Q9P2I0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPSF2Q9P2I0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPSF2Q9P2I0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
CPSF2Q9P2I0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.03
CPSF2Q9P2I0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPSF2Q9P2I0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPSF2Q9P2I0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.45■■□□□ 1.02
CPSF2Q9P2I0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.45■■□□□ 1.02
CPSF2Q9P2I0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
CPSF2Q9P2I0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.45■■□□□ 1.02
CPSF2Q9P2I0 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.45■■□□□ 1.02
CPSF2Q9P2I0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.45■■□□□ 1.02
CPSF2Q9P2I0 AL499627.2-201ENST00000606283 725 ntBASIC21.45■■□□□ 1.02
CPSF2Q9P2I0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CPSF2Q9P2I0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPSF2Q9P2I0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.45■■□□□ 1.02
CPSF2Q9P2I0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms