Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.39■□□□□ 0.85
SLC52A3Q9NQ40 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC52A3Q9NQ40 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.39■□□□□ 0.85
SLC52A3Q9NQ40 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SLC52A3Q9NQ40 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.39■□□□□ 0.85
SLC52A3Q9NQ40 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.39■□□□□ 0.85
SLC52A3Q9NQ40 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SLC52A3Q9NQ40 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC52A3Q9NQ40 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC52A3Q9NQ40 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC52A3Q9NQ40 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.38■□□□□ 0.85
SLC52A3Q9NQ40 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.38■□□□□ 0.85
SLC52A3Q9NQ40 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC52A3Q9NQ40 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.38■□□□□ 0.85
SLC52A3Q9NQ40 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC52A3Q9NQ40 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC52A3Q9NQ40 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
SLC52A3Q9NQ40 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.38■□□□□ 0.85
SLC52A3Q9NQ40 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.38■□□□□ 0.85
SLC52A3Q9NQ40 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.38■□□□□ 0.85
SLC52A3Q9NQ40 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC52A3Q9NQ40 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC52A3Q9NQ40 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.38■□□□□ 0.85
SLC52A3Q9NQ40 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC52A3Q9NQ40 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC52A3Q9NQ40 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC52A3Q9NQ40 LINC01521-201ENST00000504184 1943 ntBASIC20.37■□□□□ 0.85
SLC52A3Q9NQ40 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC52A3Q9NQ40 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.37■□□□□ 0.85
SLC52A3Q9NQ40 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.37■□□□□ 0.85
SLC52A3Q9NQ40 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC52A3Q9NQ40 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC52A3Q9NQ40 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SLC52A3Q9NQ40 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC52A3Q9NQ40 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC52A3Q9NQ40 AC009299.2-201ENST00000482477 511 ntBASIC20.37■□□□□ 0.85
SLC52A3Q9NQ40 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC52A3Q9NQ40 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC52A3Q9NQ40 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC52A3Q9NQ40 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC52A3Q9NQ40 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SLC52A3Q9NQ40 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC52A3Q9NQ40 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC52A3Q9NQ40 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SLC52A3Q9NQ40 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC52A3Q9NQ40 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC52A3Q9NQ40 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC52A3Q9NQ40 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
SLC52A3Q9NQ40 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC52A3Q9NQ40 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.36■□□□□ 0.85
SLC52A3Q9NQ40 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC52A3Q9NQ40 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SLC52A3Q9NQ40 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC52A3Q9NQ40 RARRES2P1-201ENST00000474487 481 ntBASIC20.36■□□□□ 0.85
SLC52A3Q9NQ40 AC068587.7-201ENST00000641602 218 ntBASIC20.36■□□□□ 0.85
SLC52A3Q9NQ40 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC52A3Q9NQ40 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.36■□□□□ 0.85
SLC52A3Q9NQ40 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC52A3Q9NQ40 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC52A3Q9NQ40 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC52A3Q9NQ40 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SLC52A3Q9NQ40 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC52A3Q9NQ40 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC52A3Q9NQ40 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC52A3Q9NQ40 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC52A3Q9NQ40 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC52A3Q9NQ40 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC52A3Q9NQ40 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC52A3Q9NQ40 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC52A3Q9NQ40 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC52A3Q9NQ40 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLC52A3Q9NQ40 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC52A3Q9NQ40 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC52A3Q9NQ40 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.35■□□□□ 0.85
SLC52A3Q9NQ40 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.35■□□□□ 0.85
SLC52A3Q9NQ40 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.35■□□□□ 0.85
SLC52A3Q9NQ40 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.35■□□□□ 0.85
SLC52A3Q9NQ40 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC52A3Q9NQ40 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLC52A3Q9NQ40 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
SLC52A3Q9NQ40 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC52A3Q9NQ40 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC52A3Q9NQ40 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC52A3Q9NQ40 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.34■□□□□ 0.85
SLC52A3Q9NQ40 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.34■□□□□ 0.85
SLC52A3Q9NQ40 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC52A3Q9NQ40 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC52A3Q9NQ40 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC52A3Q9NQ40 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SLC52A3Q9NQ40 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC52A3Q9NQ40 OR2I1P-207ENST00000453522 948 ntBASIC20.34■□□□□ 0.85
SLC52A3Q9NQ40 MIR3181-201ENST00000578512 73 ntBASIC20.34■□□□□ 0.85
SLC52A3Q9NQ40 AC099791.2-201ENST00000605725 427 ntBASIC20.34■□□□□ 0.85
SLC52A3Q9NQ40 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SLC52A3Q9NQ40 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC52A3Q9NQ40 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.34■□□□□ 0.85
SLC52A3Q9NQ40 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.34■□□□□ 0.85
SLC52A3Q9NQ40 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC52A3Q9NQ40 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC52A3Q9NQ40 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms