Protein–RNA interactions for Protein: Q9H7F0

ATP13A3, Probable cation-transporting ATPase 13A3, humanhuman

Predictions only

Length 1,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3Q9H7F0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP13A3Q9H7F0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ATP13A3Q9H7F0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
ATP13A3Q9H7F0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ATP13A3Q9H7F0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
ATP13A3Q9H7F0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP13A3Q9H7F0 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP13A3Q9H7F0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
ATP13A3Q9H7F0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
ATP13A3Q9H7F0 KRT18P14-201ENST00000534205 1250 ntBASIC21.7■■□□□ 1.06
ATP13A3Q9H7F0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.7■■□□□ 1.06
ATP13A3Q9H7F0 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.7■■□□□ 1.06
ATP13A3Q9H7F0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.7■■□□□ 1.06
ATP13A3Q9H7F0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.7■■□□□ 1.06
ATP13A3Q9H7F0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP13A3Q9H7F0 GUSBP5-202ENST00000510805 1989 ntBASIC21.7■■□□□ 1.06
ATP13A3Q9H7F0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP13A3Q9H7F0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
ATP13A3Q9H7F0 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ATP13A3Q9H7F0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
ATP13A3Q9H7F0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.7■■□□□ 1.06
ATP13A3Q9H7F0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP13A3Q9H7F0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
ATP13A3Q9H7F0 AC242852.2-201ENST00000615738 1807 ntBASIC21.69■■□□□ 1.06
ATP13A3Q9H7F0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP13A3Q9H7F0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP13A3Q9H7F0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.69■■□□□ 1.06
ATP13A3Q9H7F0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.69■■□□□ 1.06
ATP13A3Q9H7F0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP13A3Q9H7F0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP13A3Q9H7F0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.69■■□□□ 1.06
ATP13A3Q9H7F0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ATP13A3Q9H7F0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ATP13A3Q9H7F0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP13A3Q9H7F0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP13A3Q9H7F0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ATP13A3Q9H7F0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
ATP13A3Q9H7F0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP13A3Q9H7F0 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP13A3Q9H7F0 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ATP13A3Q9H7F0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.68■■□□□ 1.06
ATP13A3Q9H7F0 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ATP13A3Q9H7F0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.68■■□□□ 1.06
ATP13A3Q9H7F0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ATP13A3Q9H7F0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.68■■□□□ 1.06
ATP13A3Q9H7F0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP13A3Q9H7F0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.68■■□□□ 1.06
ATP13A3Q9H7F0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.68■■□□□ 1.06
ATP13A3Q9H7F0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP13A3Q9H7F0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ATP13A3Q9H7F0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.68■■□□□ 1.06
ATP13A3Q9H7F0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ATP13A3Q9H7F0 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP13A3Q9H7F0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
ATP13A3Q9H7F0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
ATP13A3Q9H7F0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
ATP13A3Q9H7F0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.67■■□□□ 1.06
ATP13A3Q9H7F0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP13A3Q9H7F0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.67■■□□□ 1.06
ATP13A3Q9H7F0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.67■■□□□ 1.06
ATP13A3Q9H7F0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ATP13A3Q9H7F0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ATP13A3Q9H7F0 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.67■■□□□ 1.06
ATP13A3Q9H7F0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ATP13A3Q9H7F0 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.67■■□□□ 1.06
ATP13A3Q9H7F0 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.67■■□□□ 1.06
ATP13A3Q9H7F0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.67■■□□□ 1.06
ATP13A3Q9H7F0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP13A3Q9H7F0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP13A3Q9H7F0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATP13A3Q9H7F0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
ATP13A3Q9H7F0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP13A3Q9H7F0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
ATP13A3Q9H7F0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.66■■□□□ 1.06
ATP13A3Q9H7F0 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATP13A3Q9H7F0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.66■■□□□ 1.06
ATP13A3Q9H7F0 DUX4L2-201ENST00000561772 1275 ntBASIC21.66■■□□□ 1.06
ATP13A3Q9H7F0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.66■■□□□ 1.06
ATP13A3Q9H7F0 DUX4L6-201ENST00000626483 1275 ntBASIC21.66■■□□□ 1.06
ATP13A3Q9H7F0 DUX4L1-201ENST00000627662 1275 ntBASIC21.66■■□□□ 1.06
ATP13A3Q9H7F0 DUX4L8-201ENST00000629013 1275 ntBASIC21.66■■□□□ 1.06
ATP13A3Q9H7F0 DUX4L3-201ENST00000630187 1275 ntBASIC21.66■■□□□ 1.06
ATP13A3Q9H7F0 DUX4L7-201ENST00000630678 1275 ntBASIC21.66■■□□□ 1.06
ATP13A3Q9H7F0 DUX4L5-201ENST00000630834 1275 ntBASIC21.66■■□□□ 1.06
ATP13A3Q9H7F0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.66■■□□□ 1.06
ATP13A3Q9H7F0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATP13A3Q9H7F0 AC092053.2-201ENST00000640557 1818 ntBASIC21.66■■□□□ 1.06
ATP13A3Q9H7F0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP13A3Q9H7F0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP13A3Q9H7F0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.65■■□□□ 1.06
ATP13A3Q9H7F0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.65■■□□□ 1.06
ATP13A3Q9H7F0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP13A3Q9H7F0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATP13A3Q9H7F0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP13A3Q9H7F0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.65■■□□□ 1.06
ATP13A3Q9H7F0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP13A3Q9H7F0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATP13A3Q9H7F0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.65■■□□□ 1.06
ATP13A3Q9H7F0 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.65■■□□□ 1.06
ATP13A3Q9H7F0 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms