Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ALX4Q9H161 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ALX4Q9H161 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ALX4Q9H161 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ALX4Q9H161 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ALX4Q9H161 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ALX4Q9H161 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.09■□□□□ 0.49
ALX4Q9H161 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.09■□□□□ 0.49
ALX4Q9H161 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.09■□□□□ 0.49
ALX4Q9H161 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ALX4Q9H161 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ALX4Q9H161 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ALX4Q9H161 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ALX4Q9H161 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.09■□□□□ 0.49
ALX4Q9H161 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ALX4Q9H161 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ALX4Q9H161 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ALX4Q9H161 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
ALX4Q9H161 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ALX4Q9H161 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ALX4Q9H161 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.08■□□□□ 0.49
ALX4Q9H161 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ALX4Q9H161 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.08■□□□□ 0.49
ALX4Q9H161 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ALX4Q9H161 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ALX4Q9H161 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
ALX4Q9H161 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ALX4Q9H161 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.08■□□□□ 0.48
ALX4Q9H161 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
ALX4Q9H161 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ALX4Q9H161 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ALX4Q9H161 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
ALX4Q9H161 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
ALX4Q9H161 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ALX4Q9H161 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ALX4Q9H161 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ALX4Q9H161 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ALX4Q9H161 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.07■□□□□ 0.48
ALX4Q9H161 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ALX4Q9H161 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.07■□□□□ 0.48
ALX4Q9H161 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.07■□□□□ 0.48
ALX4Q9H161 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ALX4Q9H161 BX664725.1-201ENST00000438252 379 ntBASIC18.07■□□□□ 0.48
ALX4Q9H161 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.07■□□□□ 0.48
ALX4Q9H161 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ALX4Q9H161 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ALX4Q9H161 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ALX4Q9H161 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ALX4Q9H161 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
ALX4Q9H161 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.07■□□□□ 0.48
ALX4Q9H161 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ALX4Q9H161 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
ALX4Q9H161 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ALX4Q9H161 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.06■□□□□ 0.48
ALX4Q9H161 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
ALX4Q9H161 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ALX4Q9H161 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
ALX4Q9H161 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ALX4Q9H161 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ALX4Q9H161 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ALX4Q9H161 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ALX4Q9H161 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ALX4Q9H161 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ALX4Q9H161 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.06■□□□□ 0.48
ALX4Q9H161 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ALX4Q9H161 OXCT2P1-201ENST00000447263 1535 ntBASIC18.05■□□□□ 0.48
ALX4Q9H161 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.05■□□□□ 0.48
ALX4Q9H161 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ALX4Q9H161 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ALX4Q9H161 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
ALX4Q9H161 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.05■□□□□ 0.48
ALX4Q9H161 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.05■□□□□ 0.48
ALX4Q9H161 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.05■□□□□ 0.48
ALX4Q9H161 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.05■□□□□ 0.48
ALX4Q9H161 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ALX4Q9H161 AC009086.3-201ENST00000623486 1008 ntBASIC18.05■□□□□ 0.48
ALX4Q9H161 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ALX4Q9H161 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
ALX4Q9H161 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ALX4Q9H161 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ALX4Q9H161 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.05■□□□□ 0.48
ALX4Q9H161 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
ALX4Q9H161 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ALX4Q9H161 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ALX4Q9H161 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ALX4Q9H161 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ALX4Q9H161 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
ALX4Q9H161 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
ALX4Q9H161 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.04■□□□□ 0.48
ALX4Q9H161 KRT125P-201ENST00000546827 989 ntBASIC18.04■□□□□ 0.48
ALX4Q9H161 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.04■□□□□ 0.48
ALX4Q9H161 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
ALX4Q9H161 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ALX4Q9H161 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ALX4Q9H161 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ALX4Q9H161 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ALX4Q9H161 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ALX4Q9H161 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
ALX4Q9H161 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ALX4Q9H161 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms