Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 MIR4787-201ENST00000607364 84 ntBASIC22.34■■□□□ 1.17
DDX47Q9H0S4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC22.34■■□□□ 1.17
DDX47Q9H0S4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.34■■□□□ 1.17
DDX47Q9H0S4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
DDX47Q9H0S4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
DDX47Q9H0S4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
DDX47Q9H0S4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.33■■□□□ 1.17
DDX47Q9H0S4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
DDX47Q9H0S4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
DDX47Q9H0S4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
DDX47Q9H0S4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC22.33■■□□□ 1.17
DDX47Q9H0S4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
DDX47Q9H0S4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.33■■□□□ 1.17
DDX47Q9H0S4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
DDX47Q9H0S4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
DDX47Q9H0S4 Z92544.1-202ENST00000571933 1220 ntBASIC22.33■■□□□ 1.17
DDX47Q9H0S4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
DDX47Q9H0S4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC22.33■■□□□ 1.16
DDX47Q9H0S4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.16
DDX47Q9H0S4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
DDX47Q9H0S4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
DDX47Q9H0S4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.32■■□□□ 1.16
DDX47Q9H0S4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
DDX47Q9H0S4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
DDX47Q9H0S4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
DDX47Q9H0S4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
DDX47Q9H0S4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
DDX47Q9H0S4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC22.32■■□□□ 1.16
DDX47Q9H0S4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22.32■■□□□ 1.16
DDX47Q9H0S4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
DDX47Q9H0S4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
DDX47Q9H0S4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.32■■□□□ 1.16
DDX47Q9H0S4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
DDX47Q9H0S4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.32■■□□□ 1.16
DDX47Q9H0S4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
DDX47Q9H0S4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
DDX47Q9H0S4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
DDX47Q9H0S4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.31■■□□□ 1.16
DDX47Q9H0S4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.31■■□□□ 1.16
DDX47Q9H0S4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
DDX47Q9H0S4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
DDX47Q9H0S4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
DDX47Q9H0S4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
DDX47Q9H0S4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
DDX47Q9H0S4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
DDX47Q9H0S4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
DDX47Q9H0S4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.31■■□□□ 1.16
DDX47Q9H0S4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
DDX47Q9H0S4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
DDX47Q9H0S4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
DDX47Q9H0S4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.31■■□□□ 1.16
DDX47Q9H0S4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.31■■□□□ 1.16
DDX47Q9H0S4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC22.3■■□□□ 1.16
DDX47Q9H0S4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
DDX47Q9H0S4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
DDX47Q9H0S4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
DDX47Q9H0S4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
DDX47Q9H0S4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.3■■□□□ 1.16
DDX47Q9H0S4 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
DDX47Q9H0S4 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
DDX47Q9H0S4 TSPY9P-201ENST00000440215 945 ntBASIC22.3■■□□□ 1.16
DDX47Q9H0S4 TSPY11P-201ENST00000442607 1045 ntBASIC22.3■■□□□ 1.16
DDX47Q9H0S4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.3■■□□□ 1.16
DDX47Q9H0S4 AL451085.2-201ENST00000605085 799 ntBASIC22.3■■□□□ 1.16
DDX47Q9H0S4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
DDX47Q9H0S4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
DDX47Q9H0S4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
DDX47Q9H0S4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
DDX47Q9H0S4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
DDX47Q9H0S4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
DDX47Q9H0S4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
DDX47Q9H0S4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.29■■□□□ 1.16
DDX47Q9H0S4 OR7E47P-201ENST00000546390 1422 ntBASIC22.29■■□□□ 1.16
DDX47Q9H0S4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.29■■□□□ 1.16
DDX47Q9H0S4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.29■■□□□ 1.16
DDX47Q9H0S4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
DDX47Q9H0S4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.29■■□□□ 1.16
DDX47Q9H0S4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
DDX47Q9H0S4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
DDX47Q9H0S4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
DDX47Q9H0S4 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
DDX47Q9H0S4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
DDX47Q9H0S4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
DDX47Q9H0S4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
DDX47Q9H0S4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.28■■□□□ 1.16
DDX47Q9H0S4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
DDX47Q9H0S4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
DDX47Q9H0S4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
DDX47Q9H0S4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
DDX47Q9H0S4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC22.28■■□□□ 1.16
DDX47Q9H0S4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.28■■□□□ 1.16
DDX47Q9H0S4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
DDX47Q9H0S4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
DDX47Q9H0S4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.28■■□□□ 1.16
DDX47Q9H0S4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
DDX47Q9H0S4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
DDX47Q9H0S4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
DDX47Q9H0S4 AC133637.1-201ENST00000624115 1537 ntBASIC22.27■■□□□ 1.16
DDX47Q9H0S4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
DDX47Q9H0S4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms