Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLIRPQ9GZT3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
SLIRPQ9GZT3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.94■□□□□ 0.62
SLIRPQ9GZT3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.94■□□□□ 0.62
SLIRPQ9GZT3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLIRPQ9GZT3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SLIRPQ9GZT3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLIRPQ9GZT3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLIRPQ9GZT3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLIRPQ9GZT3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.93■□□□□ 0.62
SLIRPQ9GZT3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.93■□□□□ 0.62
SLIRPQ9GZT3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
SLIRPQ9GZT3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLIRPQ9GZT3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.93■□□□□ 0.62
SLIRPQ9GZT3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLIRPQ9GZT3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.93■□□□□ 0.62
SLIRPQ9GZT3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.93■□□□□ 0.62
SLIRPQ9GZT3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLIRPQ9GZT3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLIRPQ9GZT3 AL049796.1-201ENST00000565336 1766 ntBASIC18.93■□□□□ 0.62
SLIRPQ9GZT3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLIRPQ9GZT3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.93■□□□□ 0.62
SLIRPQ9GZT3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLIRPQ9GZT3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLIRPQ9GZT3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLIRPQ9GZT3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.92■□□□□ 0.62
SLIRPQ9GZT3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SLIRPQ9GZT3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLIRPQ9GZT3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLIRPQ9GZT3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.92■□□□□ 0.62
SLIRPQ9GZT3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLIRPQ9GZT3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLIRPQ9GZT3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.92■□□□□ 0.62
SLIRPQ9GZT3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLIRPQ9GZT3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLIRPQ9GZT3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLIRPQ9GZT3 AC026471.6-201ENST00000622954 1905 ntBASIC18.92■□□□□ 0.62
SLIRPQ9GZT3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
SLIRPQ9GZT3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLIRPQ9GZT3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.91■□□□□ 0.62
SLIRPQ9GZT3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.91■□□□□ 0.62
SLIRPQ9GZT3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.91■□□□□ 0.62
SLIRPQ9GZT3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLIRPQ9GZT3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
SLIRPQ9GZT3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SLIRPQ9GZT3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.91■□□□□ 0.62
SLIRPQ9GZT3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLIRPQ9GZT3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLIRPQ9GZT3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.91■□□□□ 0.62
SLIRPQ9GZT3 AC087393.1-201ENST00000582896 145 ntBASIC18.91■□□□□ 0.62
SLIRPQ9GZT3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLIRPQ9GZT3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLIRPQ9GZT3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLIRPQ9GZT3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SLIRPQ9GZT3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLIRPQ9GZT3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLIRPQ9GZT3 LINC01529-204ENST00000636474 1715 ntBASIC18.91■□□□□ 0.62
SLIRPQ9GZT3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLIRPQ9GZT3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.91■□□□□ 0.62
SLIRPQ9GZT3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
SLIRPQ9GZT3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLIRPQ9GZT3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SLIRPQ9GZT3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLIRPQ9GZT3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.9■□□□□ 0.62
SLIRPQ9GZT3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.9■□□□□ 0.62
SLIRPQ9GZT3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLIRPQ9GZT3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
SLIRPQ9GZT3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SLIRPQ9GZT3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SLIRPQ9GZT3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLIRPQ9GZT3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
SLIRPQ9GZT3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLIRPQ9GZT3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLIRPQ9GZT3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SLIRPQ9GZT3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLIRPQ9GZT3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLIRPQ9GZT3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLIRPQ9GZT3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLIRPQ9GZT3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.9■□□□□ 0.62
SLIRPQ9GZT3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.9■□□□□ 0.62
SLIRPQ9GZT3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLIRPQ9GZT3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
SLIRPQ9GZT3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.89■□□□□ 0.62
SLIRPQ9GZT3 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.89■□□□□ 0.62
SLIRPQ9GZT3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SLIRPQ9GZT3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.62
SLIRPQ9GZT3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLIRPQ9GZT3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLIRPQ9GZT3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.89■□□□□ 0.61
SLIRPQ9GZT3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.89■□□□□ 0.61
SLIRPQ9GZT3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.89■□□□□ 0.61
SLIRPQ9GZT3 MIR3648-2-201ENST00000581792 180 ntBASIC18.89■□□□□ 0.61
SLIRPQ9GZT3 MIR3648-1-201ENST00000615959 180 ntBASIC18.89■□□□□ 0.61
SLIRPQ9GZT3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18.89■□□□□ 0.61
SLIRPQ9GZT3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SLIRPQ9GZT3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLIRPQ9GZT3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.89■□□□□ 0.61
SLIRPQ9GZT3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.89■□□□□ 0.61
SLIRPQ9GZT3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.89■□□□□ 0.61
SLIRPQ9GZT3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms