Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM2Q9C040 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM2Q9C040 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM2Q9C040 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM2Q9C040 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
TRIM2Q9C040 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.73■□□□□ 0.75
TRIM2Q9C040 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM2Q9C040 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TRIM2Q9C040 OXCT2P1-201ENST00000447263 1535 ntBASIC19.72■□□□□ 0.75
TRIM2Q9C040 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM2Q9C040 UNC93B3-201ENST00000308076 687 ntBASIC19.72■□□□□ 0.75
TRIM2Q9C040 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM2Q9C040 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM2Q9C040 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM2Q9C040 PBX2P1-201ENST00000493219 1291 ntBASIC19.72■□□□□ 0.75
TRIM2Q9C040 AP005435.1-201ENST00000529293 1178 ntBASIC19.72■□□□□ 0.75
TRIM2Q9C040 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.72■□□□□ 0.75
TRIM2Q9C040 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM2Q9C040 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM2Q9C040 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM2Q9C040 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM2Q9C040 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM2Q9C040 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM2Q9C040 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM2Q9C040 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.71■□□□□ 0.75
TRIM2Q9C040 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM2Q9C040 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM2Q9C040 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM2Q9C040 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM2Q9C040 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.71■□□□□ 0.75
TRIM2Q9C040 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM2Q9C040 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM2Q9C040 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM2Q9C040 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM2Q9C040 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TRIM2Q9C040 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM2Q9C040 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TRIM2Q9C040 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM2Q9C040 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM2Q9C040 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM2Q9C040 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
TRIM2Q9C040 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM2Q9C040 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM2Q9C040 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM2Q9C040 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TRIM2Q9C040 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
TRIM2Q9C040 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM2Q9C040 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TRIM2Q9C040 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM2Q9C040 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM2Q9C040 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM2Q9C040 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TRIM2Q9C040 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM2Q9C040 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM2Q9C040 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.69■□□□□ 0.74
TRIM2Q9C040 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM2Q9C040 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM2Q9C040 SLC47A1P1-202ENST00000449666 945 ntBASIC19.69■□□□□ 0.74
TRIM2Q9C040 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM2Q9C040 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM2Q9C040 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM2Q9C040 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
TRIM2Q9C040 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM2Q9C040 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM2Q9C040 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM2Q9C040 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM2Q9C040 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM2Q9C040 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM2Q9C040 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM2Q9C040 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM2Q9C040 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TRIM2Q9C040 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM2Q9C040 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM2Q9C040 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM2Q9C040 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM2Q9C040 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM2Q9C040 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM2Q9C040 AL136162.1-201ENST00000607711 1078 ntBASIC19.68■□□□□ 0.74
TRIM2Q9C040 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.68■□□□□ 0.74
TRIM2Q9C040 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM2Q9C040 AC135279.3-201ENST00000610945 1311 ntBASIC19.68■□□□□ 0.74
TRIM2Q9C040 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM2Q9C040 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM2Q9C040 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM2Q9C040 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM2Q9C040 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TRIM2Q9C040 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TRIM2Q9C040 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TRIM2Q9C040 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM2Q9C040 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
TRIM2Q9C040 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM2Q9C040 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM2Q9C040 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
TRIM2Q9C040 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM2Q9C040 AC244015.2-201ENST00000616358 1861 ntBASIC19.67■□□□□ 0.74
TRIM2Q9C040 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM2Q9C040 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM2Q9C040 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM2Q9C040 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM2Q9C040 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms