Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 AP004607.7-201ENST00000527152 1677 ntBASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 CROCCP5-201ENST00000436658 830 ntBASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 TESC-206ENST00000541210 936 ntTSL 3 BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 AC133561.1-201ENST00000568600 2415 ntBASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC7.32□□□□□ -1.24
KRTAP4-3Q9BYR4 AC139530.1-201ENST00000575312 1977 ntBASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 MAP2K4P1-201ENST00000438453 1195 ntBASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 AC068587.7-201ENST00000641602 218 ntBASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 AC055733.4-201ENST00000638462 1354 ntBASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
KRTAP4-3Q9BYR4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms