Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC12.7□□□□□ -0.38
LIMD2Q9BT23 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
LIMD2Q9BT23 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LIMD2Q9BT23 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC12.7□□□□□ -0.38
LIMD2Q9BT23 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
LIMD2Q9BT23 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LIMD2Q9BT23 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LIMD2Q9BT23 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC12.7□□□□□ -0.38
LIMD2Q9BT23 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LIMD2Q9BT23 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC12.69□□□□□ -0.38
LIMD2Q9BT23 PALM-208ENST00000592155 2272 ntTSL 4 BASIC12.69□□□□□ -0.38
LIMD2Q9BT23 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
LIMD2Q9BT23 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
LIMD2Q9BT23 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LIMD2Q9BT23 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
LIMD2Q9BT23 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LIMD2Q9BT23 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LIMD2Q9BT23 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LIMD2Q9BT23 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
LIMD2Q9BT23 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC12.69□□□□□ -0.38
LIMD2Q9BT23 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LIMD2Q9BT23 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC12.69□□□□□ -0.38
LIMD2Q9BT23 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
LIMD2Q9BT23 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LIMD2Q9BT23 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LIMD2Q9BT23 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
LIMD2Q9BT23 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LIMD2Q9BT23 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LIMD2Q9BT23 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
LIMD2Q9BT23 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LIMD2Q9BT23 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 MIR3621-201ENST00000580529 85 ntBASIC12.68□□□□□ -0.38
LIMD2Q9BT23 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 LINC01960-201ENST00000563759 1884 ntBASIC12.68□□□□□ -0.38
LIMD2Q9BT23 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LIMD2Q9BT23 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
LIMD2Q9BT23 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
LIMD2Q9BT23 AC242852.2-201ENST00000615738 1807 ntBASIC12.67□□□□□ -0.38
LIMD2Q9BT23 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC12.67□□□□□ -0.38
LIMD2Q9BT23 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
LIMD2Q9BT23 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC12.67□□□□□ -0.38
LIMD2Q9BT23 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LIMD2Q9BT23 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC12.67□□□□□ -0.38
LIMD2Q9BT23 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC12.67□□□□□ -0.38
LIMD2Q9BT23 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LIMD2Q9BT23 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LIMD2Q9BT23 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
LIMD2Q9BT23 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC12.67□□□□□ -0.38
LIMD2Q9BT23 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC12.67□□□□□ -0.38
LIMD2Q9BT23 DUX4L19-201ENST00000557448 1267 ntBASIC12.67□□□□□ -0.38
LIMD2Q9BT23 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LIMD2Q9BT23 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LIMD2Q9BT23 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC12.67□□□□□ -0.38
LIMD2Q9BT23 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
LIMD2Q9BT23 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LIMD2Q9BT23 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LIMD2Q9BT23 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LIMD2Q9BT23 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
LIMD2Q9BT23 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
LIMD2Q9BT23 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
LIMD2Q9BT23 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LIMD2Q9BT23 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC12.67□□□□□ -0.38
LIMD2Q9BT23 GATM-206ENST00000558336 1522 ntTSL 2 BASIC12.67□□□□□ -0.38
LIMD2Q9BT23 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LIMD2Q9BT23 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LIMD2Q9BT23 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC12.67□□□□□ -0.38
LIMD2Q9BT23 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIMD2Q9BT23 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIMD2Q9BT23 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms