Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
FOXC2Q99958 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXC2Q99958 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXC2Q99958 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.14■□□□□ 0.49
FOXC2Q99958 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.14■□□□□ 0.49
FOXC2Q99958 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FOXC2Q99958 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.14■□□□□ 0.49
FOXC2Q99958 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXC2Q99958 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXC2Q99958 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXC2Q99958 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
FOXC2Q99958 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.14■□□□□ 0.49
FOXC2Q99958 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.13■□□□□ 0.49
FOXC2Q99958 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXC2Q99958 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.13■□□□□ 0.49
FOXC2Q99958 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.13■□□□□ 0.49
FOXC2Q99958 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.13■□□□□ 0.49
FOXC2Q99958 AP003733.4-201ENST00000623785 1697 ntBASIC18.13■□□□□ 0.49
FOXC2Q99958 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXC2Q99958 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
FOXC2Q99958 BX276092.2-201ENST00000417668 665 ntBASIC18.13■□□□□ 0.49
FOXC2Q99958 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.13■□□□□ 0.49
FOXC2Q99958 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXC2Q99958 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.13■□□□□ 0.49
FOXC2Q99958 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.13■□□□□ 0.49
FOXC2Q99958 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.13■□□□□ 0.49
FOXC2Q99958 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
FOXC2Q99958 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.13■□□□□ 0.49
FOXC2Q99958 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
FOXC2Q99958 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXC2Q99958 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
FOXC2Q99958 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.12■□□□□ 0.49
FOXC2Q99958 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXC2Q99958 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
FOXC2Q99958 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
FOXC2Q99958 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.12■□□□□ 0.49
FOXC2Q99958 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXC2Q99958 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXC2Q99958 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXC2Q99958 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
FOXC2Q99958 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
FOXC2Q99958 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.12■□□□□ 0.49
FOXC2Q99958 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXC2Q99958 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
FOXC2Q99958 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FOXC2Q99958 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FOXC2Q99958 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXC2Q99958 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
FOXC2Q99958 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXC2Q99958 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXC2Q99958 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.11■□□□□ 0.49
FOXC2Q99958 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FOXC2Q99958 AC093787.1-201ENST00000450396 207 ntBASIC18.11■□□□□ 0.49
FOXC2Q99958 AC008550.1-201ENST00000511500 884 ntBASIC18.11■□□□□ 0.49
FOXC2Q99958 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.11■□□□□ 0.49
FOXC2Q99958 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.11■□□□□ 0.49
FOXC2Q99958 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXC2Q99958 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.11■□□□□ 0.49
FOXC2Q99958 AC055733.4-201ENST00000638462 1354 ntBASIC18.11■□□□□ 0.49
FOXC2Q99958 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.11■□□□□ 0.49
FOXC2Q99958 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FOXC2Q99958 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.11■□□□□ 0.49
FOXC2Q99958 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXC2Q99958 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
FOXC2Q99958 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.1■□□□□ 0.49
FOXC2Q99958 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXC2Q99958 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXC2Q99958 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXC2Q99958 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FOXC2Q99958 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
FOXC2Q99958 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FOXC2Q99958 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.1■□□□□ 0.49
FOXC2Q99958 UBE2SP1-201ENST00000450587 669 ntBASIC18.1■□□□□ 0.49
FOXC2Q99958 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXC2Q99958 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.1■□□□□ 0.49
FOXC2Q99958 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.1■□□□□ 0.49
FOXC2Q99958 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.1■□□□□ 0.49
FOXC2Q99958 AC016405.3-201ENST00000607710 860 ntBASIC18.1■□□□□ 0.49
FOXC2Q99958 AC020928.2-201ENST00000588717 2197 ntBASIC18.1■□□□□ 0.49
FOXC2Q99958 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.09■□□□□ 0.49
FOXC2Q99958 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.09■□□□□ 0.49
FOXC2Q99958 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
FOXC2Q99958 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXC2Q99958 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXC2Q99958 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXC2Q99958 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXC2Q99958 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.09■□□□□ 0.49
FOXC2Q99958 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXC2Q99958 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXC2Q99958 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.09■□□□□ 0.49
FOXC2Q99958 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXC2Q99958 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.09■□□□□ 0.49
FOXC2Q99958 AC026366.1-201ENST00000488803 879 ntBASIC18.09■□□□□ 0.49
FOXC2Q99958 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.09■□□□□ 0.49
FOXC2Q99958 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.09■□□□□ 0.49
FOXC2Q99958 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.09■□□□□ 0.49
FOXC2Q99958 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXC2Q99958 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
FOXC2Q99958 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXC2Q99958 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms