Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
NPAS1Q99742 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
NPAS1Q99742 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.56■□□□□ 0.72
NPAS1Q99742 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPAS1Q99742 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NPAS1Q99742 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPAS1Q99742 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPAS1Q99742 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NPAS1Q99742 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NPAS1Q99742 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.55■□□□□ 0.72
NPAS1Q99742 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.55■□□□□ 0.72
NPAS1Q99742 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
NPAS1Q99742 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.55■□□□□ 0.72
NPAS1Q99742 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NPAS1Q99742 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPAS1Q99742 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPAS1Q99742 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPAS1Q99742 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
NPAS1Q99742 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.55■□□□□ 0.72
NPAS1Q99742 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.55■□□□□ 0.72
NPAS1Q99742 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.55■□□□□ 0.72
NPAS1Q99742 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPAS1Q99742 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.55■□□□□ 0.72
NPAS1Q99742 AC026471.6-201ENST00000622954 1905 ntBASIC19.55■□□□□ 0.72
NPAS1Q99742 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
NPAS1Q99742 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NPAS1Q99742 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NPAS1Q99742 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPAS1Q99742 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.54■□□□□ 0.72
NPAS1Q99742 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.54■□□□□ 0.72
NPAS1Q99742 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPAS1Q99742 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPAS1Q99742 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPAS1Q99742 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.54■□□□□ 0.72
NPAS1Q99742 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.54■□□□□ 0.72
NPAS1Q99742 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.54■□□□□ 0.72
NPAS1Q99742 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.54■□□□□ 0.72
NPAS1Q99742 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.54■□□□□ 0.72
NPAS1Q99742 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.54■□□□□ 0.72
NPAS1Q99742 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPAS1Q99742 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPAS1Q99742 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPAS1Q99742 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPAS1Q99742 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPAS1Q99742 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
NPAS1Q99742 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
NPAS1Q99742 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
NPAS1Q99742 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
NPAS1Q99742 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.53■□□□□ 0.72
NPAS1Q99742 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPAS1Q99742 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPAS1Q99742 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPAS1Q99742 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.53■□□□□ 0.72
NPAS1Q99742 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPAS1Q99742 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPAS1Q99742 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.53■□□□□ 0.72
NPAS1Q99742 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.53■□□□□ 0.72
NPAS1Q99742 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.53■□□□□ 0.72
NPAS1Q99742 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.53■□□□□ 0.72
NPAS1Q99742 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.53■□□□□ 0.72
NPAS1Q99742 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.53■□□□□ 0.72
NPAS1Q99742 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.53■□□□□ 0.72
NPAS1Q99742 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NPAS1Q99742 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
NPAS1Q99742 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
NPAS1Q99742 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPAS1Q99742 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NPAS1Q99742 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPAS1Q99742 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPAS1Q99742 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPAS1Q99742 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.52■□□□□ 0.72
NPAS1Q99742 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
NPAS1Q99742 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPAS1Q99742 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPAS1Q99742 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
NPAS1Q99742 AP004607.7-201ENST00000527152 1677 ntBASIC19.52■□□□□ 0.71
NPAS1Q99742 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
NPAS1Q99742 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.52■□□□□ 0.71
NPAS1Q99742 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS1Q99742 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS1Q99742 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS1Q99742 AC092053.2-201ENST00000640557 1818 ntBASIC19.51■□□□□ 0.71
NPAS1Q99742 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.51■□□□□ 0.71
NPAS1Q99742 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.51■□□□□ 0.71
NPAS1Q99742 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS1Q99742 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.51■□□□□ 0.71
NPAS1Q99742 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.51■□□□□ 0.71
NPAS1Q99742 AL354811.1-201ENST00000610286 706 ntBASIC19.51■□□□□ 0.71
NPAS1Q99742 AL358852.1-201ENST00000623174 1268 ntBASIC19.51■□□□□ 0.71
NPAS1Q99742 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.51■□□□□ 0.71
NPAS1Q99742 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.51■□□□□ 0.71
NPAS1Q99742 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.51■□□□□ 0.71
NPAS1Q99742 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.51■□□□□ 0.71
NPAS1Q99742 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.51■□□□□ 0.71
NPAS1Q99742 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS1Q99742 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS1Q99742 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
NPAS1Q99742 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS1Q99742 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS1Q99742 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms