Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL12A1Q99715 AC022211.4-201ENST00000625094 2161 ntBASIC19.03■□□□□ 0.64
COL12A1Q99715 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL12A1Q99715 POU5F1P4-201ENST00000413175 1085 ntBASIC19.03■□□□□ 0.64
COL12A1Q99715 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.03■□□□□ 0.64
COL12A1Q99715 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.03■□□□□ 0.64
COL12A1Q99715 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL12A1Q99715 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL12A1Q99715 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL12A1Q99715 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL12A1Q99715 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL12A1Q99715 TMPOP1-202ENST00000424642 1267 ntBASIC19.02■□□□□ 0.64
COL12A1Q99715 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.02■□□□□ 0.64
COL12A1Q99715 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.02■□□□□ 0.64
COL12A1Q99715 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.02■□□□□ 0.64
COL12A1Q99715 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
COL12A1Q99715 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
COL12A1Q99715 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL12A1Q99715 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL12A1Q99715 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL12A1Q99715 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL12A1Q99715 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL12A1Q99715 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL12A1Q99715 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
COL12A1Q99715 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
COL12A1Q99715 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
COL12A1Q99715 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
COL12A1Q99715 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
COL12A1Q99715 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
COL12A1Q99715 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.02■□□□□ 0.63
COL12A1Q99715 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
COL12A1Q99715 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.02■□□□□ 0.63
COL12A1Q99715 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
COL12A1Q99715 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.02■□□□□ 0.63
COL12A1Q99715 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.02■□□□□ 0.63
COL12A1Q99715 AL121749.1-202ENST00000609313 2153 ntBASIC19.01■□□□□ 0.63
COL12A1Q99715 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL12A1Q99715 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL12A1Q99715 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL12A1Q99715 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL12A1Q99715 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.01■□□□□ 0.63
COL12A1Q99715 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.01■□□□□ 0.63
COL12A1Q99715 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL12A1Q99715 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL12A1Q99715 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.01■□□□□ 0.63
COL12A1Q99715 C1QBPP2-201ENST00000528754 825 ntBASIC19.01■□□□□ 0.63
COL12A1Q99715 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.01■□□□□ 0.63
COL12A1Q99715 AC008694.1-202ENST00000636953 945 ntBASIC19.01■□□□□ 0.63
COL12A1Q99715 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL12A1Q99715 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
COL12A1Q99715 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
COL12A1Q99715 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL12A1Q99715 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL12A1Q99715 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL12A1Q99715 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL12A1Q99715 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL12A1Q99715 AC008403.3-201ENST00000598924 454 ntBASIC19■□□□□ 0.63
COL12A1Q99715 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
COL12A1Q99715 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19■□□□□ 0.63
COL12A1Q99715 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19■□□□□ 0.63
COL12A1Q99715 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19■□□□□ 0.63
COL12A1Q99715 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL12A1Q99715 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL12A1Q99715 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.99■□□□□ 0.63
COL12A1Q99715 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL12A1Q99715 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL12A1Q99715 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL12A1Q99715 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL12A1Q99715 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.99■□□□□ 0.63
COL12A1Q99715 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL12A1Q99715 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.99■□□□□ 0.63
COL12A1Q99715 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL12A1Q99715 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL12A1Q99715 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.99■□□□□ 0.63
COL12A1Q99715 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL12A1Q99715 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.98■□□□□ 0.63
COL12A1Q99715 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL12A1Q99715 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL12A1Q99715 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL12A1Q99715 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.98■□□□□ 0.63
COL12A1Q99715 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.98■□□□□ 0.63
COL12A1Q99715 FAM197Y4-202ENST00000622692 608 ntBASIC18.98■□□□□ 0.63
COL12A1Q99715 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.98■□□□□ 0.63
COL12A1Q99715 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.98■□□□□ 0.63
COL12A1Q99715 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL12A1Q99715 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.98■□□□□ 0.63
COL12A1Q99715 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
COL12A1Q99715 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.98■□□□□ 0.63
COL12A1Q99715 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.98■□□□□ 0.63
COL12A1Q99715 OR10C1-204ENST00000622521 1039 ntBASIC18.98■□□□□ 0.63
COL12A1Q99715 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL12A1Q99715 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL12A1Q99715 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL12A1Q99715 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
COL12A1Q99715 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.97■□□□□ 0.63
COL12A1Q99715 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.97■□□□□ 0.63
COL12A1Q99715 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
COL12A1Q99715 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
COL12A1Q99715 AC005224.4-201ENST00000583262 1652 ntBASIC18.97■□□□□ 0.63
COL12A1Q99715 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms