Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
SCAF11Q99590 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
SCAF11Q99590 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC31.12■■■□□ 2.57
SCAF11Q99590 ADM-205ENST00000528544 586 ntTSL 2 BASIC31.12■■■□□ 2.57
SCAF11Q99590 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC31.12■■■□□ 2.57
SCAF11Q99590 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SCAF11Q99590 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SCAF11Q99590 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC31.12■■■□□ 2.57
SCAF11Q99590 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
SCAF11Q99590 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC31.11■■■□□ 2.57
SCAF11Q99590 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC31.11■■■□□ 2.57
SCAF11Q99590 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SCAF11Q99590 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC31.11■■■□□ 2.57
SCAF11Q99590 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
SCAF11Q99590 AC138907.5-202ENST00000569484 235 ntBASIC31.11■■■□□ 2.57
SCAF11Q99590 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC31.11■■■□□ 2.57
SCAF11Q99590 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SCAF11Q99590 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC31.1■■■□□ 2.57
SCAF11Q99590 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC31.1■■■□□ 2.57
SCAF11Q99590 AC068338.2-201ENST00000563278 1430 ntBASIC31.1■■■□□ 2.57
SCAF11Q99590 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
SCAF11Q99590 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC31.09■■■□□ 2.57
SCAF11Q99590 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC31.09■■■□□ 2.57
SCAF11Q99590 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
SCAF11Q99590 AC007322.4-201ENST00000509611 723 ntBASIC31.09■■■□□ 2.57
SCAF11Q99590 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC31.09■■■□□ 2.57
SCAF11Q99590 AC055733.4-201ENST00000638462 1354 ntBASIC31.09■■■□□ 2.57
SCAF11Q99590 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC31.09■■■□□ 2.57
SCAF11Q99590 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SCAF11Q99590 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC31.08■■■□□ 2.57
SCAF11Q99590 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC31.08■■■□□ 2.57
SCAF11Q99590 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC31.08■■■□□ 2.57
SCAF11Q99590 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SCAF11Q99590 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC31.08■■■□□ 2.57
SCAF11Q99590 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC31.08■■■□□ 2.57
SCAF11Q99590 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC31.08■■■□□ 2.57
SCAF11Q99590 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
SCAF11Q99590 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
SCAF11Q99590 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
SCAF11Q99590 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC31.08■■■□□ 2.57
SCAF11Q99590 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC31.07■■■□□ 2.56
SCAF11Q99590 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
SCAF11Q99590 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SCAF11Q99590 AL596275.1-201ENST00000423464 877 ntBASIC31.07■■■□□ 2.56
SCAF11Q99590 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SCAF11Q99590 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC31.07■■■□□ 2.56
SCAF11Q99590 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SCAF11Q99590 MYC-209ENST00000641252 345 ntBASIC31.06■■■□□ 2.56
SCAF11Q99590 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
SCAF11Q99590 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
SCAF11Q99590 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
SCAF11Q99590 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC31.05■■■□□ 2.56
SCAF11Q99590 BET1L-204ENST00000410108 637 ntTSL 3 BASIC31.05■■■□□ 2.56
SCAF11Q99590 AP006294.2-201ENST00000641667 209 ntBASIC31.05■■■□□ 2.56
SCAF11Q99590 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC31.05■■■□□ 2.56
SCAF11Q99590 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SCAF11Q99590 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SCAF11Q99590 AC093323.1-202ENST00000635031 2045 ntBASIC31.04■■■□□ 2.56
SCAF11Q99590 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC31.04■■■□□ 2.56
SCAF11Q99590 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SCAF11Q99590 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC31.04■■■□□ 2.56
SCAF11Q99590 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SCAF11Q99590 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
SCAF11Q99590 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SCAF11Q99590 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
SCAF11Q99590 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
SCAF11Q99590 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC31.04■■■□□ 2.56
SCAF11Q99590 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC31.04■■■□□ 2.56
SCAF11Q99590 IRX5-204ENST00000560154 879 ntTSL 5 BASIC31.04■■■□□ 2.56
SCAF11Q99590 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC31.04■■■□□ 2.56
SCAF11Q99590 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
SCAF11Q99590 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC31.04■■■□□ 2.56
SCAF11Q99590 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC31.04■■■□□ 2.56
SCAF11Q99590 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC31.04■■■□□ 2.56
SCAF11Q99590 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SCAF11Q99590 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SCAF11Q99590 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
SCAF11Q99590 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
SCAF11Q99590 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
SCAF11Q99590 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
SCAF11Q99590 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
SCAF11Q99590 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC31.02■■■□□ 2.56
SCAF11Q99590 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
SCAF11Q99590 AC093787.1-201ENST00000450396 207 ntBASIC31.02■■■□□ 2.56
SCAF11Q99590 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC31.02■■■□□ 2.56
SCAF11Q99590 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC31.02■■■□□ 2.56
SCAF11Q99590 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC31.02■■■□□ 2.56
SCAF11Q99590 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
SCAF11Q99590 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC31.02■■■□□ 2.56
SCAF11Q99590 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
SCAF11Q99590 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC31.02■■■□□ 2.56
SCAF11Q99590 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC31.01■■■□□ 2.56
SCAF11Q99590 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC31.01■■■□□ 2.56
SCAF11Q99590 OR10C1-204ENST00000622521 1039 ntBASIC31.01■■■□□ 2.56
SCAF11Q99590 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
SCAF11Q99590 DUSP8P3-201ENST00000399571 1760 ntBASIC31.01■■■□□ 2.55
SCAF11Q99590 CASP6-205ENST00000505486 538 ntTSL 4 BASIC31.01■■■□□ 2.55
SCAF11Q99590 DUSP8P5-201ENST00000422884 1815 ntBASIC31■■■□□ 2.55
SCAF11Q99590 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SCAF11Q99590 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms