Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SNX18Q96RF0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX18Q96RF0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX18Q96RF0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX18Q96RF0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX18Q96RF0 AC007952.6-201ENST00000573168 2673 ntBASIC19.46■□□□□ 0.71
SNX18Q96RF0 AC003957.1-201ENST00000625108 2673 ntBASIC19.46■□□□□ 0.71
SNX18Q96RF0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX18Q96RF0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX18Q96RF0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SNX18Q96RF0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX18Q96RF0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX18Q96RF0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX18Q96RF0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SNX18Q96RF0 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX18Q96RF0 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX18Q96RF0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX18Q96RF0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX18Q96RF0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SNX18Q96RF0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SNX18Q96RF0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.45■□□□□ 0.7
SNX18Q96RF0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNX18Q96RF0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNX18Q96RF0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNX18Q96RF0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.45■□□□□ 0.7
SNX18Q96RF0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNX18Q96RF0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SNX18Q96RF0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SNX18Q96RF0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SNX18Q96RF0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNX18Q96RF0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNX18Q96RF0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SNX18Q96RF0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNX18Q96RF0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.45■□□□□ 0.7
SNX18Q96RF0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNX18Q96RF0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNX18Q96RF0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX18Q96RF0 AF106564.1-201ENST00000607058 2553 ntBASIC19.44■□□□□ 0.7
SNX18Q96RF0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SNX18Q96RF0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX18Q96RF0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SNX18Q96RF0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX18Q96RF0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNX18Q96RF0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.44■□□□□ 0.7
SNX18Q96RF0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.44■□□□□ 0.7
SNX18Q96RF0 AL031602.1-201ENST00000633169 911 ntBASIC19.44■□□□□ 0.7
SNX18Q96RF0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX18Q96RF0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX18Q96RF0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNX18Q96RF0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.43■□□□□ 0.7
SNX18Q96RF0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX18Q96RF0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.43■□□□□ 0.7
SNX18Q96RF0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.43■□□□□ 0.7
SNX18Q96RF0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX18Q96RF0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.43■□□□□ 0.7
SNX18Q96RF0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.43■□□□□ 0.7
SNX18Q96RF0 AL139246.5-201ENST00000606645 996 ntBASIC19.43■□□□□ 0.7
SNX18Q96RF0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX18Q96RF0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX18Q96RF0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.43■□□□□ 0.7
SNX18Q96RF0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.43■□□□□ 0.7
SNX18Q96RF0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX18Q96RF0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SNX18Q96RF0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX18Q96RF0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.42■□□□□ 0.7
SNX18Q96RF0 AC133637.1-201ENST00000624115 1537 ntBASIC19.42■□□□□ 0.7
SNX18Q96RF0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX18Q96RF0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX18Q96RF0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX18Q96RF0 MIR638-201ENST00000385237 100 ntBASIC19.42■□□□□ 0.7
SNX18Q96RF0 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.42■□□□□ 0.7
SNX18Q96RF0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX18Q96RF0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.42■□□□□ 0.7
SNX18Q96RF0 MIR4466-201ENST00000606121 54 ntBASIC19.42■□□□□ 0.7
SNX18Q96RF0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX18Q96RF0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX18Q96RF0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX18Q96RF0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX18Q96RF0 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX18Q96RF0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX18Q96RF0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX18Q96RF0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SNX18Q96RF0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX18Q96RF0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX18Q96RF0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SNX18Q96RF0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.41■□□□□ 0.7
SNX18Q96RF0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.41■□□□□ 0.7
SNX18Q96RF0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX18Q96RF0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.41■□□□□ 0.7
SNX18Q96RF0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX18Q96RF0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX18Q96RF0 AC068587.7-201ENST00000641602 218 ntBASIC19.41■□□□□ 0.7
SNX18Q96RF0 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.41■□□□□ 0.7
SNX18Q96RF0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX18Q96RF0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
SNX18Q96RF0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
SNX18Q96RF0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX18Q96RF0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX18Q96RF0 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.4■□□□□ 0.7
SNX18Q96RF0 AC092171.4-201ENST00000609130 632 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms