Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CFAP53Q96M91 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC28.79■■■□□ 2.2
CFAP53Q96M91 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CFAP53Q96M91 TERT-206ENST00000508104 2486 ntTSL 5 BASIC28.79■■■□□ 2.2
CFAP53Q96M91 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC28.78■■■□□ 2.2
CFAP53Q96M91 AC242852.2-201ENST00000615738 1807 ntBASIC28.78■■■□□ 2.2
CFAP53Q96M91 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CFAP53Q96M91 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
CFAP53Q96M91 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CFAP53Q96M91 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC28.78■■■□□ 2.2
CFAP53Q96M91 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC28.78■■■□□ 2.2
CFAP53Q96M91 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC28.78■■■□□ 2.2
CFAP53Q96M91 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CFAP53Q96M91 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC28.78■■■□□ 2.2
CFAP53Q96M91 KRT18P5-201ENST00000436075 1291 ntBASIC28.78■■■□□ 2.2
CFAP53Q96M91 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC28.78■■■□□ 2.2
CFAP53Q96M91 GUSBP5-202ENST00000510805 1989 ntBASIC28.78■■■□□ 2.2
CFAP53Q96M91 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
CFAP53Q96M91 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
CFAP53Q96M91 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC28.78■■■□□ 2.2
CFAP53Q96M91 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CFAP53Q96M91 AC092053.2-201ENST00000640557 1818 ntBASIC28.78■■■□□ 2.2
CFAP53Q96M91 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC28.78■■■□□ 2.2
CFAP53Q96M91 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
CFAP53Q96M91 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC28.77■■■□□ 2.2
CFAP53Q96M91 AC012676.1-201ENST00000574705 1949 ntBASIC28.77■■■□□ 2.2
CFAP53Q96M91 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CFAP53Q96M91 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC28.77■■■□□ 2.2
CFAP53Q96M91 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CFAP53Q96M91 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CFAP53Q96M91 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC28.77■■■□□ 2.2
CFAP53Q96M91 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
CFAP53Q96M91 AP006587.3-201ENST00000525742 1516 ntBASIC28.77■■■□□ 2.2
CFAP53Q96M91 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CFAP53Q96M91 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CFAP53Q96M91 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC28.76■■■□□ 2.19
CFAP53Q96M91 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC28.76■■■□□ 2.19
CFAP53Q96M91 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC28.76■■■□□ 2.19
CFAP53Q96M91 NTF6G-201ENST00000591094 616 ntBASIC28.76■■■□□ 2.19
CFAP53Q96M91 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC28.76■■■□□ 2.19
CFAP53Q96M91 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CFAP53Q96M91 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CFAP53Q96M91 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CFAP53Q96M91 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
CFAP53Q96M91 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC28.75■■■□□ 2.19
CFAP53Q96M91 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
CFAP53Q96M91 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CFAP53Q96M91 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
CFAP53Q96M91 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC28.75■■■□□ 2.19
CFAP53Q96M91 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC28.75■■■□□ 2.19
CFAP53Q96M91 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC28.75■■■□□ 2.19
CFAP53Q96M91 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC28.75■■■□□ 2.19
CFAP53Q96M91 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC28.74■■■□□ 2.19
CFAP53Q96M91 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC28.74■■■□□ 2.19
CFAP53Q96M91 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CFAP53Q96M91 COX20-201ENST00000366528 568 ntTSL 2 BASIC28.74■■■□□ 2.19
CFAP53Q96M91 PARL-206ENST00000435888 1098 ntTSL 5 BASIC28.74■■■□□ 2.19
CFAP53Q96M91 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC28.74■■■□□ 2.19
CFAP53Q96M91 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CFAP53Q96M91 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CFAP53Q96M91 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC28.74■■■□□ 2.19
CFAP53Q96M91 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CFAP53Q96M91 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC28.74■■■□□ 2.19
CFAP53Q96M91 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CFAP53Q96M91 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CFAP53Q96M91 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
CFAP53Q96M91 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC28.73■■■□□ 2.19
CFAP53Q96M91 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CFAP53Q96M91 FXN-202ENST00000396364 980 ntTSL 5 BASIC28.73■■■□□ 2.19
CFAP53Q96M91 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC28.73■■■□□ 2.19
CFAP53Q96M91 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
CFAP53Q96M91 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC28.73■■■□□ 2.19
CFAP53Q96M91 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC28.73■■■□□ 2.19
CFAP53Q96M91 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CFAP53Q96M91 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC28.72■■■□□ 2.19
CFAP53Q96M91 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CFAP53Q96M91 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC28.72■■■□□ 2.19
CFAP53Q96M91 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
CFAP53Q96M91 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC28.72■■■□□ 2.19
CFAP53Q96M91 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC28.72■■■□□ 2.19
CFAP53Q96M91 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC28.72■■■□□ 2.19
CFAP53Q96M91 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
CFAP53Q96M91 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
CFAP53Q96M91 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
CFAP53Q96M91 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
CFAP53Q96M91 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC28.71■■■□□ 2.19
CFAP53Q96M91 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
CFAP53Q96M91 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC28.71■■■□□ 2.19
CFAP53Q96M91 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC28.71■■■□□ 2.19
CFAP53Q96M91 AC104564.3-201ENST00000582367 638 ntBASIC28.71■■■□□ 2.19
CFAP53Q96M91 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
CFAP53Q96M91 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
CFAP53Q96M91 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
CFAP53Q96M91 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC28.7■■■□□ 2.19
CFAP53Q96M91 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
CFAP53Q96M91 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC28.7■■■□□ 2.18
CFAP53Q96M91 KRT87P-202ENST00000534226 1464 ntBASIC28.7■■■□□ 2.18
CFAP53Q96M91 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
CFAP53Q96M91 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CFAP53Q96M91 MFF-207ENST00000409565 1548 ntTSL 2 BASIC28.69■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms