Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.19■□□□□ 0.66
MS4A3Q96HJ5 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MS4A3Q96HJ5 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.19■□□□□ 0.66
MS4A3Q96HJ5 AC242852.2-201ENST00000615738 1807 ntBASIC19.18■□□□□ 0.66
MS4A3Q96HJ5 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MS4A3Q96HJ5 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MS4A3Q96HJ5 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
MS4A3Q96HJ5 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MS4A3Q96HJ5 SLC47A1P1-202ENST00000449666 945 ntBASIC19.18■□□□□ 0.66
MS4A3Q96HJ5 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
MS4A3Q96HJ5 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC19.18■□□□□ 0.66
MS4A3Q96HJ5 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC19.18■□□□□ 0.66
MS4A3Q96HJ5 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC19.18■□□□□ 0.66
MS4A3Q96HJ5 AL355001.2-201ENST00000620617 1191 ntBASIC19.18■□□□□ 0.66
MS4A3Q96HJ5 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MS4A3Q96HJ5 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MS4A3Q96HJ5 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MS4A3Q96HJ5 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.18■□□□□ 0.66
MS4A3Q96HJ5 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MS4A3Q96HJ5 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MS4A3Q96HJ5 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MS4A3Q96HJ5 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MS4A3Q96HJ5 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
MS4A3Q96HJ5 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
MS4A3Q96HJ5 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.17■□□□□ 0.66
MS4A3Q96HJ5 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
MS4A3Q96HJ5 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
MS4A3Q96HJ5 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
MS4A3Q96HJ5 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MS4A3Q96HJ5 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.17■□□□□ 0.66
MS4A3Q96HJ5 AP001330.3-201ENST00000520123 633 ntBASIC19.17■□□□□ 0.66
MS4A3Q96HJ5 AF213884.3-201ENST00000563833 479 ntBASIC19.17■□□□□ 0.66
MS4A3Q96HJ5 AC008764.7-201ENST00000593779 1081 ntBASIC19.17■□□□□ 0.66
MS4A3Q96HJ5 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
MS4A3Q96HJ5 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
MS4A3Q96HJ5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
MS4A3Q96HJ5 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.17■□□□□ 0.66
MS4A3Q96HJ5 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
MS4A3Q96HJ5 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
MS4A3Q96HJ5 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MS4A3Q96HJ5 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MS4A3Q96HJ5 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
MS4A3Q96HJ5 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.16■□□□□ 0.66
MS4A3Q96HJ5 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MS4A3Q96HJ5 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.16■□□□□ 0.66
MS4A3Q96HJ5 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.16■□□□□ 0.66
MS4A3Q96HJ5 EIF2S2P3-201ENST00000428356 999 ntBASIC19.16■□□□□ 0.66
MS4A3Q96HJ5 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
MS4A3Q96HJ5 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.16■□□□□ 0.66
MS4A3Q96HJ5 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.16■□□□□ 0.66
MS4A3Q96HJ5 AL451064.1-201ENST00000607718 471 ntBASIC19.16■□□□□ 0.66
MS4A3Q96HJ5 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MS4A3Q96HJ5 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MS4A3Q96HJ5 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MS4A3Q96HJ5 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
MS4A3Q96HJ5 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MS4A3Q96HJ5 AL121603.2-201ENST00000557373 2117 ntBASIC19.16■□□□□ 0.66
MS4A3Q96HJ5 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
MS4A3Q96HJ5 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.15■□□□□ 0.66
MS4A3Q96HJ5 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
MS4A3Q96HJ5 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
MS4A3Q96HJ5 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A3Q96HJ5 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A3Q96HJ5 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
MS4A3Q96HJ5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A3Q96HJ5 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.15■□□□□ 0.66
MS4A3Q96HJ5 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.15■□□□□ 0.66
MS4A3Q96HJ5 SUDS3P1-201ENST00000505831 966 ntBASIC19.15■□□□□ 0.66
MS4A3Q96HJ5 AC142381.2-201ENST00000566120 298 ntBASIC19.15■□□□□ 0.66
MS4A3Q96HJ5 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.15■□□□□ 0.66
MS4A3Q96HJ5 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A3Q96HJ5 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A3Q96HJ5 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A3Q96HJ5 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A3Q96HJ5 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
MS4A3Q96HJ5 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A3Q96HJ5 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A3Q96HJ5 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
MS4A3Q96HJ5 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
MS4A3Q96HJ5 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
MS4A3Q96HJ5 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
MS4A3Q96HJ5 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
MS4A3Q96HJ5 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MS4A3Q96HJ5 MIR939-201ENST00000401314 82 ntBASIC19.14■□□□□ 0.65
MS4A3Q96HJ5 BX842568.3-201ENST00000418104 571 ntBASIC19.14■□□□□ 0.65
MS4A3Q96HJ5 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC19.14■□□□□ 0.65
MS4A3Q96HJ5 OR2I1P-207ENST00000453522 948 ntBASIC19.14■□□□□ 0.65
MS4A3Q96HJ5 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.14■□□□□ 0.65
MS4A3Q96HJ5 AL132657.2-201ENST00000564417 358 ntBASIC19.14■□□□□ 0.65
MS4A3Q96HJ5 AC022148.2-201ENST00000586176 560 ntBASIC19.14■□□□□ 0.65
MS4A3Q96HJ5 AL136967.2-201ENST00000623968 743 ntBASIC19.14■□□□□ 0.65
MS4A3Q96HJ5 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
MS4A3Q96HJ5 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
MS4A3Q96HJ5 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
MS4A3Q96HJ5 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.14■□□□□ 0.65
MS4A3Q96HJ5 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.14■□□□□ 0.65
MS4A3Q96HJ5 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MS4A3Q96HJ5 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MS4A3Q96HJ5 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MS4A3Q96HJ5 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms