Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.02■■□□□ 1.12
IFT43Q96FT9 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
IFT43Q96FT9 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
IFT43Q96FT9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
IFT43Q96FT9 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.02■■□□□ 1.12
IFT43Q96FT9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.11
IFT43Q96FT9 PKD1P6-201ENST00000343738 4769 ntBASIC22.02■■□□□ 1.11
IFT43Q96FT9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
IFT43Q96FT9 AC080038.3-201ENST00000623346 1952 ntBASIC22.01■■□□□ 1.11
IFT43Q96FT9 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
IFT43Q96FT9 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
IFT43Q96FT9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
IFT43Q96FT9 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.01■■□□□ 1.11
IFT43Q96FT9 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.01■■□□□ 1.11
IFT43Q96FT9 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
IFT43Q96FT9 AC010141.3-201ENST00000456659 717 ntBASIC22.01■■□□□ 1.11
IFT43Q96FT9 AL162430.1-201ENST00000480705 870 ntBASIC22.01■■□□□ 1.11
IFT43Q96FT9 AP005435.1-201ENST00000529293 1178 ntBASIC22.01■■□□□ 1.11
IFT43Q96FT9 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.01■■□□□ 1.11
IFT43Q96FT9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.01■■□□□ 1.11
IFT43Q96FT9 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
IFT43Q96FT9 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.01■■□□□ 1.11
IFT43Q96FT9 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
IFT43Q96FT9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
IFT43Q96FT9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
IFT43Q96FT9 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
IFT43Q96FT9 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
IFT43Q96FT9 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.01■■□□□ 1.11
IFT43Q96FT9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
IFT43Q96FT9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
IFT43Q96FT9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
IFT43Q96FT9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
IFT43Q96FT9 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
IFT43Q96FT9 IGHV3-19-201ENST00000521488 291 ntBASIC22■■□□□ 1.11
IFT43Q96FT9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22■■□□□ 1.11
IFT43Q96FT9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22■■□□□ 1.11
IFT43Q96FT9 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
IFT43Q96FT9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22■■□□□ 1.11
IFT43Q96FT9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
IFT43Q96FT9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22■■□□□ 1.11
IFT43Q96FT9 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
IFT43Q96FT9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
IFT43Q96FT9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
IFT43Q96FT9 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.99■■□□□ 1.11
IFT43Q96FT9 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.99■■□□□ 1.11
IFT43Q96FT9 AL358852.1-201ENST00000623174 1268 ntBASIC21.99■■□□□ 1.11
IFT43Q96FT9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
IFT43Q96FT9 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
IFT43Q96FT9 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.99■■□□□ 1.11
IFT43Q96FT9 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
IFT43Q96FT9 TSPY26P-201ENST00000476365 1326 ntBASIC21.99■■□□□ 1.11
IFT43Q96FT9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.99■■□□□ 1.11
IFT43Q96FT9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.99■■□□□ 1.11
IFT43Q96FT9 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
IFT43Q96FT9 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.98■■□□□ 1.11
IFT43Q96FT9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
IFT43Q96FT9 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
IFT43Q96FT9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
IFT43Q96FT9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
IFT43Q96FT9 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.98■■□□□ 1.11
IFT43Q96FT9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
IFT43Q96FT9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
IFT43Q96FT9 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
IFT43Q96FT9 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.98■■□□□ 1.11
IFT43Q96FT9 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
IFT43Q96FT9 AC139530.1-201ENST00000575312 1977 ntBASIC21.98■■□□□ 1.11
IFT43Q96FT9 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
IFT43Q96FT9 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
IFT43Q96FT9 ECEL1P1-201ENST00000373592 1742 ntBASIC21.97■■□□□ 1.11
IFT43Q96FT9 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
IFT43Q96FT9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
IFT43Q96FT9 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
IFT43Q96FT9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.97■■□□□ 1.11
IFT43Q96FT9 YBX1P1-201ENST00000445822 960 ntBASIC21.97■■□□□ 1.11
IFT43Q96FT9 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
IFT43Q96FT9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.97■■□□□ 1.11
IFT43Q96FT9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
IFT43Q96FT9 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
IFT43Q96FT9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.97■■□□□ 1.11
IFT43Q96FT9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
IFT43Q96FT9 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.97■■□□□ 1.11
IFT43Q96FT9 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
IFT43Q96FT9 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
IFT43Q96FT9 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
IFT43Q96FT9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
IFT43Q96FT9 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
IFT43Q96FT9 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
IFT43Q96FT9 MIR572-201ENST00000384983 95 ntBASIC21.96■■□□□ 1.11
IFT43Q96FT9 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
IFT43Q96FT9 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
IFT43Q96FT9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.96■■□□□ 1.11
IFT43Q96FT9 AC034268.1-201ENST00000441047 882 ntBASIC21.96■■□□□ 1.11
IFT43Q96FT9 AC079089.2-201ENST00000531211 1277 ntBASIC21.96■■□□□ 1.11
IFT43Q96FT9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
IFT43Q96FT9 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
IFT43Q96FT9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.96■■□□□ 1.11
IFT43Q96FT9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.96■■□□□ 1.11
IFT43Q96FT9 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
IFT43Q96FT9 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
IFT43Q96FT9 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms