Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SSMEM1Q8WWF3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SSMEM1Q8WWF3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.71■□□□□ 0.43
SSMEM1Q8WWF3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSMEM1Q8WWF3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSMEM1Q8WWF3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SSMEM1Q8WWF3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.71■□□□□ 0.43
SSMEM1Q8WWF3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SSMEM1Q8WWF3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SSMEM1Q8WWF3 LINC02228-203ENST00000641970 1355 ntBASIC17.7■□□□□ 0.42
SSMEM1Q8WWF3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SSMEM1Q8WWF3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
SSMEM1Q8WWF3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.7■□□□□ 0.42
SSMEM1Q8WWF3 AC105233.4-201ENST00000642045 216 ntBASIC17.7■□□□□ 0.42
SSMEM1Q8WWF3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.7■□□□□ 0.42
SSMEM1Q8WWF3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSMEM1Q8WWF3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.7■□□□□ 0.42
SSMEM1Q8WWF3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSMEM1Q8WWF3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
SSMEM1Q8WWF3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.7■□□□□ 0.42
SSMEM1Q8WWF3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSMEM1Q8WWF3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SSMEM1Q8WWF3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
SSMEM1Q8WWF3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.69■□□□□ 0.42
SSMEM1Q8WWF3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SSMEM1Q8WWF3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSMEM1Q8WWF3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSMEM1Q8WWF3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSMEM1Q8WWF3 AC137767.1-201ENST00000602918 1920 ntBASIC17.69■□□□□ 0.42
SSMEM1Q8WWF3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSMEM1Q8WWF3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSMEM1Q8WWF3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.69■□□□□ 0.42
SSMEM1Q8WWF3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SSMEM1Q8WWF3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.69■□□□□ 0.42
SSMEM1Q8WWF3 AL031602.1-201ENST00000633169 911 ntBASIC17.69■□□□□ 0.42
SSMEM1Q8WWF3 AC068587.7-201ENST00000641602 218 ntBASIC17.69■□□□□ 0.42
SSMEM1Q8WWF3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSMEM1Q8WWF3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSMEM1Q8WWF3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSMEM1Q8WWF3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SSMEM1Q8WWF3 AC007375.3-201ENST00000600936 2314 ntBASIC17.69■□□□□ 0.42
SSMEM1Q8WWF3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SSMEM1Q8WWF3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SSMEM1Q8WWF3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSMEM1Q8WWF3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SSMEM1Q8WWF3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
SSMEM1Q8WWF3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.68■□□□□ 0.42
SSMEM1Q8WWF3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSMEM1Q8WWF3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SSMEM1Q8WWF3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SSMEM1Q8WWF3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.68■□□□□ 0.42
SSMEM1Q8WWF3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSMEM1Q8WWF3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SSMEM1Q8WWF3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.68■□□□□ 0.42
SSMEM1Q8WWF3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.68■□□□□ 0.42
SSMEM1Q8WWF3 KRT18P5-201ENST00000436075 1291 ntBASIC17.68■□□□□ 0.42
SSMEM1Q8WWF3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.68■□□□□ 0.42
SSMEM1Q8WWF3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.68■□□□□ 0.42
SSMEM1Q8WWF3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.68■□□□□ 0.42
SSMEM1Q8WWF3 DUX4L2-201ENST00000561772 1275 ntBASIC17.68■□□□□ 0.42
SSMEM1Q8WWF3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
SSMEM1Q8WWF3 AC087239.1-201ENST00000622671 572 ntBASIC17.68■□□□□ 0.42
SSMEM1Q8WWF3 DUX4L6-201ENST00000626483 1275 ntBASIC17.68■□□□□ 0.42
SSMEM1Q8WWF3 DUX4L1-201ENST00000627662 1275 ntBASIC17.68■□□□□ 0.42
SSMEM1Q8WWF3 DUX4L8-201ENST00000629013 1275 ntBASIC17.68■□□□□ 0.42
SSMEM1Q8WWF3 DUX4L3-201ENST00000630187 1275 ntBASIC17.68■□□□□ 0.42
SSMEM1Q8WWF3 DUX4L7-201ENST00000630678 1275 ntBASIC17.68■□□□□ 0.42
SSMEM1Q8WWF3 DUX4L5-201ENST00000630834 1275 ntBASIC17.68■□□□□ 0.42
SSMEM1Q8WWF3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SSMEM1Q8WWF3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.68■□□□□ 0.42
SSMEM1Q8WWF3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SSMEM1Q8WWF3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.68■□□□□ 0.42
SSMEM1Q8WWF3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SSMEM1Q8WWF3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.68■□□□□ 0.42
SSMEM1Q8WWF3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SSMEM1Q8WWF3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SSMEM1Q8WWF3 AC242852.2-201ENST00000615738 1807 ntBASIC17.68■□□□□ 0.42
SSMEM1Q8WWF3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.67■□□□□ 0.42
SSMEM1Q8WWF3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSMEM1Q8WWF3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSMEM1Q8WWF3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.67■□□□□ 0.42
SSMEM1Q8WWF3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSMEM1Q8WWF3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.67■□□□□ 0.42
SSMEM1Q8WWF3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.67■□□□□ 0.42
SSMEM1Q8WWF3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSMEM1Q8WWF3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSMEM1Q8WWF3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSMEM1Q8WWF3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.67■□□□□ 0.42
SSMEM1Q8WWF3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.67■□□□□ 0.42
SSMEM1Q8WWF3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.67■□□□□ 0.42
SSMEM1Q8WWF3 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.67■□□□□ 0.42
SSMEM1Q8WWF3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.67■□□□□ 0.42
SSMEM1Q8WWF3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.67■□□□□ 0.42
SSMEM1Q8WWF3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SSMEM1Q8WWF3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.67■□□□□ 0.42
SSMEM1Q8WWF3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.67■□□□□ 0.42
SSMEM1Q8WWF3 CCDC92B-201ENST00000575506 885 ntBASIC17.67■□□□□ 0.42
SSMEM1Q8WWF3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SSMEM1Q8WWF3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.67■□□□□ 0.42
SSMEM1Q8WWF3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms