Protein–RNA interactions for Protein: Q8NDV7

TNRC6A, Trinucleotide repeat-containing gene 6A protein, humanhuman

Known RBP Predictions only

Length 1,962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6AQ8NDV7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNRC6AQ8NDV7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNRC6AQ8NDV7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNRC6AQ8NDV7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TNRC6AQ8NDV7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TNRC6AQ8NDV7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNRC6AQ8NDV7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TNRC6AQ8NDV7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TNRC6AQ8NDV7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.7■□□□□ 0.74
TNRC6AQ8NDV7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.7■□□□□ 0.74
TNRC6AQ8NDV7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TNRC6AQ8NDV7 AC092068.2-201ENST00000590491 1708 ntBASIC19.7■□□□□ 0.74
TNRC6AQ8NDV7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.7■□□□□ 0.74
TNRC6AQ8NDV7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNRC6AQ8NDV7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNRC6AQ8NDV7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
TNRC6AQ8NDV7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TNRC6AQ8NDV7 AC068338.2-201ENST00000563278 1430 ntBASIC19.7■□□□□ 0.74
TNRC6AQ8NDV7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
TNRC6AQ8NDV7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNRC6AQ8NDV7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNRC6AQ8NDV7 MKRN4P-201ENST00000444706 1521 ntBASIC19.7■□□□□ 0.74
TNRC6AQ8NDV7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
TNRC6AQ8NDV7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNRC6AQ8NDV7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNRC6AQ8NDV7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.69■□□□□ 0.74
TNRC6AQ8NDV7 AC073210.2-201ENST00000430369 194 ntBASIC19.69■□□□□ 0.74
TNRC6AQ8NDV7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNRC6AQ8NDV7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNRC6AQ8NDV7 AC133552.2-202ENST00000575694 574 ntBASIC19.69■□□□□ 0.74
TNRC6AQ8NDV7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNRC6AQ8NDV7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNRC6AQ8NDV7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.69■□□□□ 0.74
TNRC6AQ8NDV7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.69■□□□□ 0.74
TNRC6AQ8NDV7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TNRC6AQ8NDV7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.69■□□□□ 0.74
TNRC6AQ8NDV7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNRC6AQ8NDV7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNRC6AQ8NDV7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNRC6AQ8NDV7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TNRC6AQ8NDV7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TNRC6AQ8NDV7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.68■□□□□ 0.74
TNRC6AQ8NDV7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.68■□□□□ 0.74
TNRC6AQ8NDV7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TNRC6AQ8NDV7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNRC6AQ8NDV7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNRC6AQ8NDV7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNRC6AQ8NDV7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNRC6AQ8NDV7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TNRC6AQ8NDV7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.68■□□□□ 0.74
TNRC6AQ8NDV7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.67■□□□□ 0.74
TNRC6AQ8NDV7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TNRC6AQ8NDV7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.67■□□□□ 0.74
TNRC6AQ8NDV7 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.67■□□□□ 0.74
TNRC6AQ8NDV7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.67■□□□□ 0.74
TNRC6AQ8NDV7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNRC6AQ8NDV7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TNRC6AQ8NDV7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNRC6AQ8NDV7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNRC6AQ8NDV7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNRC6AQ8NDV7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
TNRC6AQ8NDV7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TNRC6AQ8NDV7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNRC6AQ8NDV7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNRC6AQ8NDV7 POU5F1P3-201ENST00000428824 1078 ntBASIC19.66■□□□□ 0.74
TNRC6AQ8NDV7 FAM201B-201ENST00000458407 597 ntBASIC19.66■□□□□ 0.74
TNRC6AQ8NDV7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.66■□□□□ 0.74
TNRC6AQ8NDV7 AC016405.3-201ENST00000607710 860 ntBASIC19.66■□□□□ 0.74
TNRC6AQ8NDV7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.66■□□□□ 0.74
TNRC6AQ8NDV7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TNRC6AQ8NDV7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNRC6AQ8NDV7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNRC6AQ8NDV7 RPS2P52-201ENST00000469610 820 ntBASIC19.65■□□□□ 0.74
TNRC6AQ8NDV7 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.65■□□□□ 0.74
TNRC6AQ8NDV7 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.65■□□□□ 0.74
TNRC6AQ8NDV7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNRC6AQ8NDV7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TNRC6AQ8NDV7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNRC6AQ8NDV7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNRC6AQ8NDV7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
TNRC6AQ8NDV7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TNRC6AQ8NDV7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TNRC6AQ8NDV7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TNRC6AQ8NDV7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.64■□□□□ 0.74
TNRC6AQ8NDV7 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.64■□□□□ 0.74
TNRC6AQ8NDV7 AC079089.2-201ENST00000531211 1277 ntBASIC19.64■□□□□ 0.74
TNRC6AQ8NDV7 ITM2C-210ENST00000620962 501 ntBASIC19.64■□□□□ 0.74
TNRC6AQ8NDV7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TNRC6AQ8NDV7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TNRC6AQ8NDV7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TNRC6AQ8NDV7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNRC6AQ8NDV7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.64■□□□□ 0.73
TNRC6AQ8NDV7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.64■□□□□ 0.73
TNRC6AQ8NDV7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.64■□□□□ 0.73
TNRC6AQ8NDV7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.64■□□□□ 0.73
TNRC6AQ8NDV7 AC083880.1-201ENST00000608266 535 ntBASIC19.64■□□□□ 0.73
TNRC6AQ8NDV7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.64■□□□□ 0.73
TNRC6AQ8NDV7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TNRC6AQ8NDV7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNRC6AQ8NDV7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms