Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRAM1L1Q8N609 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
TRAM1L1Q8N609 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
TRAM1L1Q8N609 KRT18P14-201ENST00000534205 1250 ntBASIC21.29■■□□□ 1
TRAM1L1Q8N609 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.29■■□□□ 1
TRAM1L1Q8N609 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.29■■□□□ 1
TRAM1L1Q8N609 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.29■■□□□ 1
TRAM1L1Q8N609 AP006587.3-201ENST00000525742 1516 ntBASIC21.29■■□□□ 1
TRAM1L1Q8N609 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRAM1L1Q8N609 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
TRAM1L1Q8N609 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
TRAM1L1Q8N609 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
TRAM1L1Q8N609 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.28■■□□□ 1
TRAM1L1Q8N609 AC055733.4-201ENST00000638462 1354 ntBASIC21.28■■□□□ 1
TRAM1L1Q8N609 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRAM1L1Q8N609 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
TRAM1L1Q8N609 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.28■■□□□ 1
TRAM1L1Q8N609 AC034268.1-201ENST00000441047 882 ntBASIC21.28■■□□□ 1
TRAM1L1Q8N609 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
TRAM1L1Q8N609 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
TRAM1L1Q8N609 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
TRAM1L1Q8N609 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRAM1L1Q8N609 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRAM1L1Q8N609 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRAM1L1Q8N609 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
TRAM1L1Q8N609 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.27■■□□□ 1
TRAM1L1Q8N609 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRAM1L1Q8N609 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.27■■□□□ 1
TRAM1L1Q8N609 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.27■■□□□ 1
TRAM1L1Q8N609 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.27■■□□□ 1
TRAM1L1Q8N609 MIR5787-201ENST00000611784 55 ntBASIC21.27■■□□□ 1
TRAM1L1Q8N609 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.27■■□□□ 1
TRAM1L1Q8N609 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TRAM1L1Q8N609 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
TRAM1L1Q8N609 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRAM1L1Q8N609 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
TRAM1L1Q8N609 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRAM1L1Q8N609 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAM1L1Q8N609 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRAM1L1Q8N609 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAM1L1Q8N609 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.26■□□□□ 0.99
TRAM1L1Q8N609 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRAM1L1Q8N609 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRAM1L1Q8N609 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
TRAM1L1Q8N609 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAM1L1Q8N609 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.26■□□□□ 0.99
TRAM1L1Q8N609 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRAM1L1Q8N609 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.26■□□□□ 0.99
TRAM1L1Q8N609 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.26■□□□□ 0.99
TRAM1L1Q8N609 DUX4L2-201ENST00000561772 1275 ntBASIC21.26■□□□□ 0.99
TRAM1L1Q8N609 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.26■□□□□ 0.99
TRAM1L1Q8N609 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRAM1L1Q8N609 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.26■□□□□ 0.99
TRAM1L1Q8N609 DUX4L6-201ENST00000626483 1275 ntBASIC21.26■□□□□ 0.99
TRAM1L1Q8N609 DUX4L1-201ENST00000627662 1275 ntBASIC21.26■□□□□ 0.99
TRAM1L1Q8N609 DUX4L8-201ENST00000629013 1275 ntBASIC21.26■□□□□ 0.99
TRAM1L1Q8N609 DUX4L3-201ENST00000630187 1275 ntBASIC21.26■□□□□ 0.99
TRAM1L1Q8N609 DUX4L7-201ENST00000630678 1275 ntBASIC21.26■□□□□ 0.99
TRAM1L1Q8N609 DUX4L5-201ENST00000630834 1275 ntBASIC21.26■□□□□ 0.99
TRAM1L1Q8N609 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRAM1L1Q8N609 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.26■□□□□ 0.99
TRAM1L1Q8N609 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAM1L1Q8N609 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAM1L1Q8N609 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAM1L1Q8N609 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.25■□□□□ 0.99
TRAM1L1Q8N609 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAM1L1Q8N609 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAM1L1Q8N609 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAM1L1Q8N609 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.25■□□□□ 0.99
TRAM1L1Q8N609 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRAM1L1Q8N609 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRAM1L1Q8N609 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRAM1L1Q8N609 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAM1L1Q8N609 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.25■□□□□ 0.99
TRAM1L1Q8N609 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
TRAM1L1Q8N609 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.25■□□□□ 0.99
TRAM1L1Q8N609 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.24■□□□□ 0.99
TRAM1L1Q8N609 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
TRAM1L1Q8N609 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAM1L1Q8N609 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAM1L1Q8N609 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.24■□□□□ 0.99
TRAM1L1Q8N609 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRAM1L1Q8N609 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.23■□□□□ 0.99
TRAM1L1Q8N609 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAM1L1Q8N609 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.23■□□□□ 0.99
TRAM1L1Q8N609 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAM1L1Q8N609 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRAM1L1Q8N609 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAM1L1Q8N609 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.23■□□□□ 0.99
TRAM1L1Q8N609 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.23■□□□□ 0.99
TRAM1L1Q8N609 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRAM1L1Q8N609 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.23■□□□□ 0.99
TRAM1L1Q8N609 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.23■□□□□ 0.99
TRAM1L1Q8N609 AC079140.4-201ENST00000507448 529 ntBASIC21.23■□□□□ 0.99
TRAM1L1Q8N609 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.23■□□□□ 0.99
TRAM1L1Q8N609 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAM1L1Q8N609 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAM1L1Q8N609 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.23■□□□□ 0.99
TRAM1L1Q8N609 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRAM1L1Q8N609 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms