Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
C11orf42Q8N5U0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
C11orf42Q8N5U0 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
C11orf42Q8N5U0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
C11orf42Q8N5U0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
C11orf42Q8N5U0 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
C11orf42Q8N5U0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.8■□□□□ 0.44
C11orf42Q8N5U0 SMUG1P1-201ENST00000590640 811 ntBASIC17.8■□□□□ 0.44
C11orf42Q8N5U0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
C11orf42Q8N5U0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
C11orf42Q8N5U0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
C11orf42Q8N5U0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
C11orf42Q8N5U0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.8■□□□□ 0.44
C11orf42Q8N5U0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
C11orf42Q8N5U0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.79■□□□□ 0.44
C11orf42Q8N5U0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
C11orf42Q8N5U0 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
C11orf42Q8N5U0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
C11orf42Q8N5U0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.79■□□□□ 0.44
C11orf42Q8N5U0 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.79■□□□□ 0.44
C11orf42Q8N5U0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
C11orf42Q8N5U0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
C11orf42Q8N5U0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
C11orf42Q8N5U0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.79■□□□□ 0.44
C11orf42Q8N5U0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
C11orf42Q8N5U0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.79■□□□□ 0.44
C11orf42Q8N5U0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
C11orf42Q8N5U0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
C11orf42Q8N5U0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
C11orf42Q8N5U0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.78■□□□□ 0.44
C11orf42Q8N5U0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
C11orf42Q8N5U0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
C11orf42Q8N5U0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.78■□□□□ 0.44
C11orf42Q8N5U0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
C11orf42Q8N5U0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.78■□□□□ 0.44
C11orf42Q8N5U0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
C11orf42Q8N5U0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
C11orf42Q8N5U0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
C11orf42Q8N5U0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
C11orf42Q8N5U0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
C11orf42Q8N5U0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
C11orf42Q8N5U0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
C11orf42Q8N5U0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
C11orf42Q8N5U0 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
C11orf42Q8N5U0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
C11orf42Q8N5U0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.77■□□□□ 0.44
C11orf42Q8N5U0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
C11orf42Q8N5U0 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
C11orf42Q8N5U0 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.77■□□□□ 0.44
C11orf42Q8N5U0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
C11orf42Q8N5U0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.77■□□□□ 0.44
C11orf42Q8N5U0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
C11orf42Q8N5U0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
C11orf42Q8N5U0 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
C11orf42Q8N5U0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.77■□□□□ 0.44
C11orf42Q8N5U0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.77■□□□□ 0.44
C11orf42Q8N5U0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
C11orf42Q8N5U0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
C11orf42Q8N5U0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.77■□□□□ 0.44
C11orf42Q8N5U0 AC012414.1-201ENST00000556676 535 ntBASIC17.77■□□□□ 0.44
C11orf42Q8N5U0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.77■□□□□ 0.44
C11orf42Q8N5U0 AC105233.4-201ENST00000642045 216 ntBASIC17.77■□□□□ 0.44
C11orf42Q8N5U0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.77■□□□□ 0.44
C11orf42Q8N5U0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.77■□□□□ 0.44
C11orf42Q8N5U0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
C11orf42Q8N5U0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.77■□□□□ 0.43
C11orf42Q8N5U0 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
C11orf42Q8N5U0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
C11orf42Q8N5U0 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
C11orf42Q8N5U0 GUSBP5-202ENST00000510805 1989 ntBASIC17.77■□□□□ 0.43
C11orf42Q8N5U0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.76■□□□□ 0.43
C11orf42Q8N5U0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C11orf42Q8N5U0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
C11orf42Q8N5U0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
C11orf42Q8N5U0 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.76■□□□□ 0.43
C11orf42Q8N5U0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.76■□□□□ 0.43
C11orf42Q8N5U0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.76■□□□□ 0.43
C11orf42Q8N5U0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
C11orf42Q8N5U0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.76■□□□□ 0.43
C11orf42Q8N5U0 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.76■□□□□ 0.43
C11orf42Q8N5U0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.76■□□□□ 0.43
C11orf42Q8N5U0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C11orf42Q8N5U0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
C11orf42Q8N5U0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
C11orf42Q8N5U0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C11orf42Q8N5U0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
C11orf42Q8N5U0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
C11orf42Q8N5U0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
C11orf42Q8N5U0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
C11orf42Q8N5U0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
C11orf42Q8N5U0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
C11orf42Q8N5U0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.75■□□□□ 0.43
C11orf42Q8N5U0 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
C11orf42Q8N5U0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C11orf42Q8N5U0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C11orf42Q8N5U0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
C11orf42Q8N5U0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C11orf42Q8N5U0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.75■□□□□ 0.43
C11orf42Q8N5U0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C11orf42Q8N5U0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms