Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SIX5Q8N196 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.04■■□□□ 1.12
SIX5Q8N196 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SIX5Q8N196 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SIX5Q8N196 AC055733.4-201ENST00000638462 1354 ntBASIC22.03■■□□□ 1.12
SIX5Q8N196 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SIX5Q8N196 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SIX5Q8N196 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC22.03■■□□□ 1.12
SIX5Q8N196 ESRRAP1-201ENST00000400596 1257 ntBASIC22.03■■□□□ 1.12
SIX5Q8N196 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.03■■□□□ 1.12
SIX5Q8N196 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SIX5Q8N196 AL158047.1-201ENST00000445918 881 ntBASIC22.03■■□□□ 1.12
SIX5Q8N196 TERF1P5-201ENST00000477545 1207 ntBASIC22.03■■□□□ 1.12
SIX5Q8N196 AC138907.5-202ENST00000569484 235 ntBASIC22.03■■□□□ 1.12
SIX5Q8N196 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SIX5Q8N196 AC092118.2-201ENST00000613495 667 ntBASIC22.03■■□□□ 1.12
SIX5Q8N196 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.03■■□□□ 1.12
SIX5Q8N196 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SIX5Q8N196 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SIX5Q8N196 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
SIX5Q8N196 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
SIX5Q8N196 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SIX5Q8N196 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SIX5Q8N196 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC22.02■■□□□ 1.12
SIX5Q8N196 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.02■■□□□ 1.12
SIX5Q8N196 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
SIX5Q8N196 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
SIX5Q8N196 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.02■■□□□ 1.12
SIX5Q8N196 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.02■■□□□ 1.12
SIX5Q8N196 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
SIX5Q8N196 DUSP8P3-201ENST00000399571 1760 ntBASIC22.02■■□□□ 1.11
SIX5Q8N196 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
SIX5Q8N196 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SIX5Q8N196 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SIX5Q8N196 DUSP8P5-201ENST00000422884 1815 ntBASIC22.01■■□□□ 1.11
SIX5Q8N196 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SIX5Q8N196 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SIX5Q8N196 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SIX5Q8N196 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC22.01■■□□□ 1.11
SIX5Q8N196 AL596275.1-201ENST00000423464 877 ntBASIC22.01■■□□□ 1.11
SIX5Q8N196 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.01■■□□□ 1.11
SIX5Q8N196 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SIX5Q8N196 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SIX5Q8N196 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
SIX5Q8N196 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22■■□□□ 1.11
SIX5Q8N196 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22■■□□□ 1.11
SIX5Q8N196 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22■■□□□ 1.11
SIX5Q8N196 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
SIX5Q8N196 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
SIX5Q8N196 AC093787.1-201ENST00000450396 207 ntBASIC22■■□□□ 1.11
SIX5Q8N196 ADM-205ENST00000528544 586 ntTSL 2 BASIC22■■□□□ 1.11
SIX5Q8N196 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC22■■□□□ 1.11
SIX5Q8N196 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22■■□□□ 1.11
SIX5Q8N196 OR10C1-204ENST00000622521 1039 ntBASIC22■■□□□ 1.11
SIX5Q8N196 AC008694.1-202ENST00000636953 945 ntBASIC22■■□□□ 1.11
SIX5Q8N196 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
SIX5Q8N196 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22■■□□□ 1.11
SIX5Q8N196 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
SIX5Q8N196 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
SIX5Q8N196 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SIX5Q8N196 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SIX5Q8N196 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SIX5Q8N196 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.99■■□□□ 1.11
SIX5Q8N196 RPS2P4-201ENST00000476944 856 ntBASIC21.99■■□□□ 1.11
SIX5Q8N196 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.99■■□□□ 1.11
SIX5Q8N196 AC083880.1-201ENST00000608266 535 ntBASIC21.99■■□□□ 1.11
SIX5Q8N196 AC138932.3-201ENST00000567634 1902 ntBASIC21.99■■□□□ 1.11
SIX5Q8N196 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
SIX5Q8N196 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SIX5Q8N196 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SIX5Q8N196 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
SIX5Q8N196 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
SIX5Q8N196 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SIX5Q8N196 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SIX5Q8N196 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.98■■□□□ 1.11
SIX5Q8N196 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.98■■□□□ 1.11
SIX5Q8N196 BX276092.2-201ENST00000417668 665 ntBASIC21.98■■□□□ 1.11
SIX5Q8N196 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.98■■□□□ 1.11
SIX5Q8N196 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
SIX5Q8N196 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.98■■□□□ 1.11
SIX5Q8N196 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SIX5Q8N196 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.98■■□□□ 1.11
SIX5Q8N196 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.98■■□□□ 1.11
SIX5Q8N196 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.98■■□□□ 1.11
SIX5Q8N196 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.98■■□□□ 1.11
SIX5Q8N196 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.98■■□□□ 1.11
SIX5Q8N196 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SIX5Q8N196 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.98■■□□□ 1.11
SIX5Q8N196 AC016405.3-201ENST00000607710 860 ntBASIC21.98■■□□□ 1.11
SIX5Q8N196 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.98■■□□□ 1.11
SIX5Q8N196 LINC00543-201ENST00000567234 1845 ntBASIC21.98■■□□□ 1.11
SIX5Q8N196 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SIX5Q8N196 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.98■■□□□ 1.11
SIX5Q8N196 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
SIX5Q8N196 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
SIX5Q8N196 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SIX5Q8N196 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
SIX5Q8N196 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.97■■□□□ 1.11
SIX5Q8N196 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.97■■□□□ 1.11
SIX5Q8N196 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms