Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
COL27A1Q8IZC6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.5■□□□□ 0.87
COL27A1Q8IZC6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.5■□□□□ 0.87
COL27A1Q8IZC6 AC105036.2-201ENST00000569468 176 ntBASIC20.5■□□□□ 0.87
COL27A1Q8IZC6 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.49■□□□□ 0.87
COL27A1Q8IZC6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL27A1Q8IZC6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL27A1Q8IZC6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
COL27A1Q8IZC6 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.49■□□□□ 0.87
COL27A1Q8IZC6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL27A1Q8IZC6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
COL27A1Q8IZC6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL27A1Q8IZC6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL27A1Q8IZC6 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL27A1Q8IZC6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.48■□□□□ 0.87
COL27A1Q8IZC6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
COL27A1Q8IZC6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.48■□□□□ 0.87
COL27A1Q8IZC6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL27A1Q8IZC6 AC008687.6-201ENST00000596318 630 ntBASIC20.48■□□□□ 0.87
COL27A1Q8IZC6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL27A1Q8IZC6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL27A1Q8IZC6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL27A1Q8IZC6 AC093827.2-201ENST00000512654 315 ntBASIC20.47■□□□□ 0.87
COL27A1Q8IZC6 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
COL27A1Q8IZC6 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.47■□□□□ 0.87
COL27A1Q8IZC6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.47■□□□□ 0.87
COL27A1Q8IZC6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.47■□□□□ 0.87
COL27A1Q8IZC6 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL27A1Q8IZC6 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL27A1Q8IZC6 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL27A1Q8IZC6 MKRN4P-201ENST00000444706 1521 ntBASIC20.47■□□□□ 0.87
COL27A1Q8IZC6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL27A1Q8IZC6 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL27A1Q8IZC6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
COL27A1Q8IZC6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL27A1Q8IZC6 AC098590.1-201ENST00000468126 897 ntBASIC20.47■□□□□ 0.87
COL27A1Q8IZC6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
COL27A1Q8IZC6 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.47■□□□□ 0.87
COL27A1Q8IZC6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.47■□□□□ 0.87
COL27A1Q8IZC6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.47■□□□□ 0.87
COL27A1Q8IZC6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL27A1Q8IZC6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
COL27A1Q8IZC6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.47■□□□□ 0.87
COL27A1Q8IZC6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL27A1Q8IZC6 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL27A1Q8IZC6 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL27A1Q8IZC6 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL27A1Q8IZC6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.46■□□□□ 0.87
COL27A1Q8IZC6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.46■□□□□ 0.87
COL27A1Q8IZC6 AC016405.3-201ENST00000607710 860 ntBASIC20.46■□□□□ 0.87
COL27A1Q8IZC6 ITM2C-210ENST00000620962 501 ntBASIC20.46■□□□□ 0.87
COL27A1Q8IZC6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.46■□□□□ 0.87
COL27A1Q8IZC6 AC133041.1-202ENST00000642053 222 ntBASIC20.46■□□□□ 0.87
COL27A1Q8IZC6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL27A1Q8IZC6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.46■□□□□ 0.87
COL27A1Q8IZC6 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL27A1Q8IZC6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.45■□□□□ 0.87
COL27A1Q8IZC6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.45■□□□□ 0.86
COL27A1Q8IZC6 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.45■□□□□ 0.86
COL27A1Q8IZC6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.45■□□□□ 0.86
COL27A1Q8IZC6 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL27A1Q8IZC6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL27A1Q8IZC6 OR7E47P-201ENST00000546390 1422 ntBASIC20.45■□□□□ 0.86
COL27A1Q8IZC6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL27A1Q8IZC6 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
COL27A1Q8IZC6 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL27A1Q8IZC6 POU5F1P3-201ENST00000428824 1078 ntBASIC20.45■□□□□ 0.86
COL27A1Q8IZC6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL27A1Q8IZC6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
COL27A1Q8IZC6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL27A1Q8IZC6 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL27A1Q8IZC6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL27A1Q8IZC6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL27A1Q8IZC6 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
COL27A1Q8IZC6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.44■□□□□ 0.86
COL27A1Q8IZC6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.44■□□□□ 0.86
COL27A1Q8IZC6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.44■□□□□ 0.86
COL27A1Q8IZC6 MYC-209ENST00000641252 345 ntBASIC20.44■□□□□ 0.86
COL27A1Q8IZC6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL27A1Q8IZC6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL27A1Q8IZC6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL27A1Q8IZC6 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL27A1Q8IZC6 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL27A1Q8IZC6 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.43■□□□□ 0.86
COL27A1Q8IZC6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL27A1Q8IZC6 RNA5SP413-201ENST00000516373 109 ntBASIC20.43■□□□□ 0.86
COL27A1Q8IZC6 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL27A1Q8IZC6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
COL27A1Q8IZC6 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL27A1Q8IZC6 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL27A1Q8IZC6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL27A1Q8IZC6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL27A1Q8IZC6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.43■□□□□ 0.86
COL27A1Q8IZC6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.43■□□□□ 0.86
COL27A1Q8IZC6 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.43■□□□□ 0.86
COL27A1Q8IZC6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL27A1Q8IZC6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
COL27A1Q8IZC6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL27A1Q8IZC6 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL27A1Q8IZC6 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms