Protein–RNA interactions for Protein: Q8IYB3

SRRM1, Serine/arginine repetitive matrix protein 1, humanhuman

Known RBP Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1Q8IYB3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SRRM1Q8IYB3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SRRM1Q8IYB3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SRRM1Q8IYB3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SRRM1Q8IYB3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SRRM1Q8IYB3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SRRM1Q8IYB3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SRRM1Q8IYB3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SRRM1Q8IYB3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SRRM1Q8IYB3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.71■■□□□ 1.07
SRRM1Q8IYB3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SRRM1Q8IYB3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SRRM1Q8IYB3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SRRM1Q8IYB3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SRRM1Q8IYB3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.71■■□□□ 1.07
SRRM1Q8IYB3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SRRM1Q8IYB3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.7■■□□□ 1.07
SRRM1Q8IYB3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.7■■□□□ 1.06
SRRM1Q8IYB3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SRRM1Q8IYB3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SRRM1Q8IYB3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.7■■□□□ 1.06
SRRM1Q8IYB3 MIR6722-201ENST00000617286 78 ntBASIC21.7■■□□□ 1.06
SRRM1Q8IYB3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
SRRM1Q8IYB3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SRRM1Q8IYB3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SRRM1Q8IYB3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SRRM1Q8IYB3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.7■■□□□ 1.06
SRRM1Q8IYB3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SRRM1Q8IYB3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SRRM1Q8IYB3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SRRM1Q8IYB3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.7■■□□□ 1.06
SRRM1Q8IYB3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SRRM1Q8IYB3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SRRM1Q8IYB3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SRRM1Q8IYB3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.69■■□□□ 1.06
SRRM1Q8IYB3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SRRM1Q8IYB3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SRRM1Q8IYB3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SRRM1Q8IYB3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.69■■□□□ 1.06
SRRM1Q8IYB3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SRRM1Q8IYB3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.69■■□□□ 1.06
SRRM1Q8IYB3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.69■■□□□ 1.06
SRRM1Q8IYB3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SRRM1Q8IYB3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.69■■□□□ 1.06
SRRM1Q8IYB3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SRRM1Q8IYB3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.69■■□□□ 1.06
SRRM1Q8IYB3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SRRM1Q8IYB3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SRRM1Q8IYB3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
SRRM1Q8IYB3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SRRM1Q8IYB3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SRRM1Q8IYB3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.69■■□□□ 1.06
SRRM1Q8IYB3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SRRM1Q8IYB3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SRRM1Q8IYB3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SRRM1Q8IYB3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SRRM1Q8IYB3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRRM1Q8IYB3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
SRRM1Q8IYB3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRRM1Q8IYB3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRRM1Q8IYB3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
SRRM1Q8IYB3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SRRM1Q8IYB3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.67■■□□□ 1.06
SRRM1Q8IYB3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.67■■□□□ 1.06
SRRM1Q8IYB3 AC137630.3-201ENST00000607245 391 ntBASIC21.67■■□□□ 1.06
SRRM1Q8IYB3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRRM1Q8IYB3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SRRM1Q8IYB3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SRRM1Q8IYB3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SRRM1Q8IYB3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SRRM1Q8IYB3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SRRM1Q8IYB3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.66■■□□□ 1.06
SRRM1Q8IYB3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.66■■□□□ 1.06
SRRM1Q8IYB3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SRRM1Q8IYB3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SRRM1Q8IYB3 LINC01521-201ENST00000504184 1943 ntBASIC21.66■■□□□ 1.06
SRRM1Q8IYB3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SRRM1Q8IYB3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SRRM1Q8IYB3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SRRM1Q8IYB3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SRRM1Q8IYB3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SRRM1Q8IYB3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SRRM1Q8IYB3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SRRM1Q8IYB3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SRRM1Q8IYB3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
SRRM1Q8IYB3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SRRM1Q8IYB3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.65■■□□□ 1.06
SRRM1Q8IYB3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SRRM1Q8IYB3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SRRM1Q8IYB3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SRRM1Q8IYB3 MIR638-201ENST00000385237 100 ntBASIC21.65■■□□□ 1.06
SRRM1Q8IYB3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SRRM1Q8IYB3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
SRRM1Q8IYB3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SRRM1Q8IYB3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
SRRM1Q8IYB3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SRRM1Q8IYB3 AC026471.6-201ENST00000622954 1905 ntBASIC21.65■■□□□ 1.06
SRRM1Q8IYB3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
SRRM1Q8IYB3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SRRM1Q8IYB3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms