Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC31.03■■■□□ 2.56
UBR1Q8IWV7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC31.02■■■□□ 2.56
UBR1Q8IWV7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
UBR1Q8IWV7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC31.02■■■□□ 2.56
UBR1Q8IWV7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC31.02■■■□□ 2.56
UBR1Q8IWV7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
UBR1Q8IWV7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
UBR1Q8IWV7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
UBR1Q8IWV7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
UBR1Q8IWV7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
UBR1Q8IWV7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC31.01■■■□□ 2.56
UBR1Q8IWV7 ESRRAP1-201ENST00000400596 1257 ntBASIC31.01■■■□□ 2.56
UBR1Q8IWV7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
UBR1Q8IWV7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC31.01■■■□□ 2.56
UBR1Q8IWV7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC31.01■■■□□ 2.56
UBR1Q8IWV7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC31.01■■■□□ 2.56
UBR1Q8IWV7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
UBR1Q8IWV7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC31.01■■■□□ 2.56
UBR1Q8IWV7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
UBR1Q8IWV7 AL139125.2-201ENST00000623134 1869 ntBASIC31.01■■■□□ 2.55
UBR1Q8IWV7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
UBR1Q8IWV7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
UBR1Q8IWV7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC31.01■■■□□ 2.55
UBR1Q8IWV7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
UBR1Q8IWV7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.55
UBR1Q8IWV7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC31.01■■■□□ 2.55
UBR1Q8IWV7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC31.01■■■□□ 2.55
UBR1Q8IWV7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC31.01■■■□□ 2.55
UBR1Q8IWV7 AL158047.1-201ENST00000445918 881 ntBASIC31.01■■■□□ 2.55
UBR1Q8IWV7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC31.01■■■□□ 2.55
UBR1Q8IWV7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
UBR1Q8IWV7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC31.01■■■□□ 2.55
UBR1Q8IWV7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC31.01■■■□□ 2.55
UBR1Q8IWV7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC31.01■■■□□ 2.55
UBR1Q8IWV7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC31.01■■■□□ 2.55
UBR1Q8IWV7 AP006294.2-201ENST00000641667 209 ntBASIC31.01■■■□□ 2.55
UBR1Q8IWV7 AP004607.7-201ENST00000527152 1677 ntBASIC31.01■■■□□ 2.55
UBR1Q8IWV7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC31.01■■■□□ 2.55
UBR1Q8IWV7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
UBR1Q8IWV7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC31■■■□□ 2.55
UBR1Q8IWV7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC31■■■□□ 2.55
UBR1Q8IWV7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC31■■■□□ 2.55
UBR1Q8IWV7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC31■■■□□ 2.55
UBR1Q8IWV7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
UBR1Q8IWV7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC31■■■□□ 2.55
UBR1Q8IWV7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC31■■■□□ 2.55
UBR1Q8IWV7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
UBR1Q8IWV7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC31■■■□□ 2.55
UBR1Q8IWV7 AP006587.3-201ENST00000525742 1516 ntBASIC31■■■□□ 2.55
UBR1Q8IWV7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC31■■■□□ 2.55
UBR1Q8IWV7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC30.99■■■□□ 2.55
UBR1Q8IWV7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
UBR1Q8IWV7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC30.99■■■□□ 2.55
UBR1Q8IWV7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC30.99■■■□□ 2.55
UBR1Q8IWV7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC30.98■■■□□ 2.55
UBR1Q8IWV7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC30.98■■■□□ 2.55
UBR1Q8IWV7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC30.98■■■□□ 2.55
UBR1Q8IWV7 USP36-216ENST00000589424 970 ntTSL 5 BASIC30.98■■■□□ 2.55
UBR1Q8IWV7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC30.98■■■□□ 2.55
UBR1Q8IWV7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC30.98■■■□□ 2.55
UBR1Q8IWV7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
UBR1Q8IWV7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
UBR1Q8IWV7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
UBR1Q8IWV7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
UBR1Q8IWV7 UNC93B4-201ENST00000505679 747 ntBASIC30.98■■■□□ 2.55
UBR1Q8IWV7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC30.98■■■□□ 2.55
UBR1Q8IWV7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC30.98■■■□□ 2.55
UBR1Q8IWV7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC30.98■■■□□ 2.55
UBR1Q8IWV7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
UBR1Q8IWV7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
UBR1Q8IWV7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
UBR1Q8IWV7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
UBR1Q8IWV7 UNC93B5-201ENST00000530315 699 ntBASIC30.97■■■□□ 2.55
UBR1Q8IWV7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
UBR1Q8IWV7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
UBR1Q8IWV7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
UBR1Q8IWV7 AC004812.2-201ENST00000611079 2094 ntBASIC30.96■■■□□ 2.55
UBR1Q8IWV7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC30.96■■■□□ 2.55
UBR1Q8IWV7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC30.96■■■□□ 2.55
UBR1Q8IWV7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC30.96■■■□□ 2.55
UBR1Q8IWV7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC30.96■■■□□ 2.55
UBR1Q8IWV7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
UBR1Q8IWV7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC30.96■■■□□ 2.55
UBR1Q8IWV7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
UBR1Q8IWV7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
UBR1Q8IWV7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC30.95■■■□□ 2.55
UBR1Q8IWV7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
UBR1Q8IWV7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
UBR1Q8IWV7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
UBR1Q8IWV7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC30.95■■■□□ 2.55
UBR1Q8IWV7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC30.95■■■□□ 2.55
UBR1Q8IWV7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
UBR1Q8IWV7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
UBR1Q8IWV7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
UBR1Q8IWV7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC30.95■■■□□ 2.54
UBR1Q8IWV7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC30.95■■■□□ 2.54
UBR1Q8IWV7 AC079089.2-201ENST00000531211 1277 ntBASIC30.95■■■□□ 2.54
UBR1Q8IWV7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC30.95■■■□□ 2.54
UBR1Q8IWV7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC30.94■■■□□ 2.54
UBR1Q8IWV7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms