Protein–RNA interactions for Protein: Q86YD5

LDLRAD3, Low-density lipoprotein receptor class A domain-containing protein 3, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3Q86YD5 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LDLRAD3Q86YD5 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LDLRAD3Q86YD5 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LDLRAD3Q86YD5 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LDLRAD3Q86YD5 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LDLRAD3Q86YD5 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.22■□□□□ 0.51
LDLRAD3Q86YD5 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.22■□□□□ 0.51
LDLRAD3Q86YD5 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LDLRAD3Q86YD5 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LDLRAD3Q86YD5 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LDLRAD3Q86YD5 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LDLRAD3Q86YD5 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LDLRAD3Q86YD5 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
LDLRAD3Q86YD5 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
LDLRAD3Q86YD5 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
LDLRAD3Q86YD5 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LDLRAD3Q86YD5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LDLRAD3Q86YD5 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
LDLRAD3Q86YD5 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LDLRAD3Q86YD5 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LDLRAD3Q86YD5 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LDLRAD3Q86YD5 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LDLRAD3Q86YD5 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
LDLRAD3Q86YD5 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LDLRAD3Q86YD5 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.21■□□□□ 0.51
LDLRAD3Q86YD5 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.21■□□□□ 0.51
LDLRAD3Q86YD5 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.21■□□□□ 0.51
LDLRAD3Q86YD5 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.21■□□□□ 0.51
LDLRAD3Q86YD5 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.21■□□□□ 0.51
LDLRAD3Q86YD5 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LDLRAD3Q86YD5 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LDLRAD3Q86YD5 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LDLRAD3Q86YD5 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LDLRAD3Q86YD5 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LDLRAD3Q86YD5 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LDLRAD3Q86YD5 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.21■□□□□ 0.51
LDLRAD3Q86YD5 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.21■□□□□ 0.51
LDLRAD3Q86YD5 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LDLRAD3Q86YD5 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LDLRAD3Q86YD5 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LDLRAD3Q86YD5 MIR939-201ENST00000401314 82 ntBASIC18.2■□□□□ 0.5
LDLRAD3Q86YD5 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.2■□□□□ 0.5
LDLRAD3Q86YD5 MIR4767-201ENST00000582827 78 ntBASIC18.2■□□□□ 0.5
LDLRAD3Q86YD5 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LDLRAD3Q86YD5 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LDLRAD3Q86YD5 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
LDLRAD3Q86YD5 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LDLRAD3Q86YD5 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LDLRAD3Q86YD5 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LDLRAD3Q86YD5 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
LDLRAD3Q86YD5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LDLRAD3Q86YD5 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LDLRAD3Q86YD5 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LDLRAD3Q86YD5 AC091305.1-201ENST00000479476 895 ntBASIC18.19■□□□□ 0.5
LDLRAD3Q86YD5 AP001330.3-201ENST00000520123 633 ntBASIC18.19■□□□□ 0.5
LDLRAD3Q86YD5 AF213884.3-201ENST00000563833 479 ntBASIC18.19■□□□□ 0.5
LDLRAD3Q86YD5 LINC01529-204ENST00000636474 1715 ntBASIC18.19■□□□□ 0.5
LDLRAD3Q86YD5 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
LDLRAD3Q86YD5 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
LDLRAD3Q86YD5 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LDLRAD3Q86YD5 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LDLRAD3Q86YD5 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.19■□□□□ 0.5
LDLRAD3Q86YD5 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LDLRAD3Q86YD5 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LDLRAD3Q86YD5 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LDLRAD3Q86YD5 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LDLRAD3Q86YD5 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.18■□□□□ 0.5
LDLRAD3Q86YD5 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LDLRAD3Q86YD5 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LDLRAD3Q86YD5 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LDLRAD3Q86YD5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LDLRAD3Q86YD5 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LDLRAD3Q86YD5 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.18■□□□□ 0.5
LDLRAD3Q86YD5 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.18■□□□□ 0.5
LDLRAD3Q86YD5 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.18■□□□□ 0.5
LDLRAD3Q86YD5 AC009086.3-201ENST00000623486 1008 ntBASIC18.18■□□□□ 0.5
LDLRAD3Q86YD5 AL136967.2-201ENST00000623968 743 ntBASIC18.18■□□□□ 0.5
LDLRAD3Q86YD5 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.18■□□□□ 0.5
LDLRAD3Q86YD5 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LDLRAD3Q86YD5 AF106564.1-201ENST00000607058 2553 ntBASIC18.18■□□□□ 0.5
LDLRAD3Q86YD5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LDLRAD3Q86YD5 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LDLRAD3Q86YD5 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.17■□□□□ 0.5
LDLRAD3Q86YD5 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.17■□□□□ 0.5
LDLRAD3Q86YD5 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LDLRAD3Q86YD5 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LDLRAD3Q86YD5 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LDLRAD3Q86YD5 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.17■□□□□ 0.5
LDLRAD3Q86YD5 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LDLRAD3Q86YD5 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LDLRAD3Q86YD5 ZNRF2P3-201ENST00000424200 374 ntBASIC18.17■□□□□ 0.5
LDLRAD3Q86YD5 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LDLRAD3Q86YD5 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.17■□□□□ 0.5
LDLRAD3Q86YD5 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LDLRAD3Q86YD5 AC136469.2-201ENST00000623944 1028 ntBASIC18.17■□□□□ 0.5
LDLRAD3Q86YD5 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LDLRAD3Q86YD5 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.17■□□□□ 0.5
LDLRAD3Q86YD5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LDLRAD3Q86YD5 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.17■□□□□ 0.5
LDLRAD3Q86YD5 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms