Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
DDX53Q86TM3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.89■■□□□ 1.25
DDX53Q86TM3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
DDX53Q86TM3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
DDX53Q86TM3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
DDX53Q86TM3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.88■■□□□ 1.25
DDX53Q86TM3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
DDX53Q86TM3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC22.88■■□□□ 1.25
DDX53Q86TM3 TMEM191A-211ENST00000637163 1067 ntBASIC22.88■■□□□ 1.25
DDX53Q86TM3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.88■■□□□ 1.25
DDX53Q86TM3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
DDX53Q86TM3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.88■■□□□ 1.25
DDX53Q86TM3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
DDX53Q86TM3 LINC00526-201ENST00000581067 1875 ntBASIC22.88■■□□□ 1.25
DDX53Q86TM3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.88■■□□□ 1.25
DDX53Q86TM3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
DDX53Q86TM3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.87■■□□□ 1.25
DDX53Q86TM3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
DDX53Q86TM3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
DDX53Q86TM3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
DDX53Q86TM3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
DDX53Q86TM3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
DDX53Q86TM3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
DDX53Q86TM3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
DDX53Q86TM3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
DDX53Q86TM3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
DDX53Q86TM3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC22.87■■□□□ 1.25
DDX53Q86TM3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
DDX53Q86TM3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
DDX53Q86TM3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.87■■□□□ 1.25
DDX53Q86TM3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC22.87■■□□□ 1.25
DDX53Q86TM3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.87■■□□□ 1.25
DDX53Q86TM3 AL138781.1-201ENST00000566567 1274 ntBASIC22.87■■□□□ 1.25
DDX53Q86TM3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.87■■□□□ 1.25
DDX53Q86TM3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
DDX53Q86TM3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
DDX53Q86TM3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
DDX53Q86TM3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
DDX53Q86TM3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC22.86■■□□□ 1.25
DDX53Q86TM3 AF201337.1-201ENST00000520239 748 ntBASIC22.86■■□□□ 1.25
DDX53Q86TM3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
DDX53Q86TM3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.86■■□□□ 1.25
DDX53Q86TM3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
DDX53Q86TM3 SLC7A5P1-201ENST00000568957 537 ntBASIC22.86■■□□□ 1.25
DDX53Q86TM3 AC133552.2-202ENST00000575694 574 ntBASIC22.86■■□□□ 1.25
DDX53Q86TM3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC22.86■■□□□ 1.25
DDX53Q86TM3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC22.86■■□□□ 1.25
DDX53Q86TM3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
DDX53Q86TM3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX53Q86TM3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
DDX53Q86TM3 KRT18P6-201ENST00000555540 1265 ntBASIC22.85■■□□□ 1.25
DDX53Q86TM3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC22.85■■□□□ 1.25
DDX53Q86TM3 EEF1DP3-203ENST00000566025 782 ntBASIC22.85■■□□□ 1.25
DDX53Q86TM3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX53Q86TM3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
DDX53Q86TM3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX53Q86TM3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX53Q86TM3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.85■■□□□ 1.25
DDX53Q86TM3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.84■■□□□ 1.25
DDX53Q86TM3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.84■■□□□ 1.25
DDX53Q86TM3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DDX53Q86TM3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DDX53Q86TM3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DDX53Q86TM3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
DDX53Q86TM3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC22.84■■□□□ 1.25
DDX53Q86TM3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC22.84■■□□□ 1.25
DDX53Q86TM3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
DDX53Q86TM3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DDX53Q86TM3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX53Q86TM3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
DDX53Q86TM3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
DDX53Q86TM3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.83■■□□□ 1.25
DDX53Q86TM3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
DDX53Q86TM3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
DDX53Q86TM3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
DDX53Q86TM3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.83■■□□□ 1.25
DDX53Q86TM3 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.83■■□□□ 1.25
DDX53Q86TM3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
DDX53Q86TM3 AC105036.2-201ENST00000569468 176 ntBASIC22.83■■□□□ 1.25
DDX53Q86TM3 AC053503.5-201ENST00000601508 636 ntBASIC22.83■■□□□ 1.25
DDX53Q86TM3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
DDX53Q86TM3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.83■■□□□ 1.24
DDX53Q86TM3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.82■■□□□ 1.24
DDX53Q86TM3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
DDX53Q86TM3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
DDX53Q86TM3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
DDX53Q86TM3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
DDX53Q86TM3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
DDX53Q86TM3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.82■■□□□ 1.24
DDX53Q86TM3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
DDX53Q86TM3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.82■■□□□ 1.24
DDX53Q86TM3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.82■■□□□ 1.24
DDX53Q86TM3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.82■■□□□ 1.24
DDX53Q86TM3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
DDX53Q86TM3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
DDX53Q86TM3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
DDX53Q86TM3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.82■■□□□ 1.24
DDX53Q86TM3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
DDX53Q86TM3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
DDX53Q86TM3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms