Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.34■■□□□ 1.17
DENND4AQ7Z401 MIR4758-201ENST00000577688 71 ntBASIC22.34■■□□□ 1.17
DENND4AQ7Z401 MYC-209ENST00000641252 345 ntBASIC22.34■■□□□ 1.17
DENND4AQ7Z401 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
DENND4AQ7Z401 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
DENND4AQ7Z401 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
DENND4AQ7Z401 AP006587.3-201ENST00000525742 1516 ntBASIC22.33■■□□□ 1.17
DENND4AQ7Z401 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
DENND4AQ7Z401 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
DENND4AQ7Z401 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
DENND4AQ7Z401 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC22.33■■□□□ 1.17
DENND4AQ7Z401 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.33■■□□□ 1.16
DENND4AQ7Z401 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
DENND4AQ7Z401 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.32■■□□□ 1.16
DENND4AQ7Z401 AC092118.2-201ENST00000613495 667 ntBASIC22.32■■□□□ 1.16
DENND4AQ7Z401 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
DENND4AQ7Z401 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.32■■□□□ 1.16
DENND4AQ7Z401 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC22.32■■□□□ 1.16
DENND4AQ7Z401 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC22.32■■□□□ 1.16
DENND4AQ7Z401 OR10C1-204ENST00000622521 1039 ntBASIC22.32■■□□□ 1.16
DENND4AQ7Z401 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
DENND4AQ7Z401 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
DENND4AQ7Z401 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
DENND4AQ7Z401 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
DENND4AQ7Z401 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.31■■□□□ 1.16
DENND4AQ7Z401 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
DENND4AQ7Z401 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
DENND4AQ7Z401 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
DENND4AQ7Z401 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
DENND4AQ7Z401 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
DENND4AQ7Z401 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
DENND4AQ7Z401 MIPEPP3-201ENST00000412105 444 ntBASIC22.3■■□□□ 1.16
DENND4AQ7Z401 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC22.3■■□□□ 1.16
DENND4AQ7Z401 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.3■■□□□ 1.16
DENND4AQ7Z401 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
DENND4AQ7Z401 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.3■■□□□ 1.16
DENND4AQ7Z401 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
DENND4AQ7Z401 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
DENND4AQ7Z401 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
DENND4AQ7Z401 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.3■■□□□ 1.16
DENND4AQ7Z401 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.3■■□□□ 1.16
DENND4AQ7Z401 AC079089.2-201ENST00000531211 1277 ntBASIC22.3■■□□□ 1.16
DENND4AQ7Z401 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.3■■□□□ 1.16
DENND4AQ7Z401 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.3■■□□□ 1.16
DENND4AQ7Z401 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC22.3■■□□□ 1.16
DENND4AQ7Z401 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
DENND4AQ7Z401 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.3■■□□□ 1.16
DENND4AQ7Z401 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
DENND4AQ7Z401 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC22.29■■□□□ 1.16
DENND4AQ7Z401 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC22.29■■□□□ 1.16
DENND4AQ7Z401 RHEB-204ENST00000472642 900 ntTSL 3 BASIC22.29■■□□□ 1.16
DENND4AQ7Z401 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
DENND4AQ7Z401 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
DENND4AQ7Z401 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
DENND4AQ7Z401 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
DENND4AQ7Z401 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
DENND4AQ7Z401 GCSHP5-201ENST00000443090 522 ntBASIC22.28■■□□□ 1.16
DENND4AQ7Z401 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC22.28■■□□□ 1.16
DENND4AQ7Z401 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
DENND4AQ7Z401 AC093787.1-201ENST00000450396 207 ntBASIC22.28■■□□□ 1.16
DENND4AQ7Z401 ADM-205ENST00000528544 586 ntTSL 2 BASIC22.28■■□□□ 1.16
DENND4AQ7Z401 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC22.28■■□□□ 1.16
DENND4AQ7Z401 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
DENND4AQ7Z401 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
DENND4AQ7Z401 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
DENND4AQ7Z401 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
DENND4AQ7Z401 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.28■■□□□ 1.16
DENND4AQ7Z401 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.28■■□□□ 1.16
DENND4AQ7Z401 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
DENND4AQ7Z401 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
DENND4AQ7Z401 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.28■■□□□ 1.16
DENND4AQ7Z401 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
DENND4AQ7Z401 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
DENND4AQ7Z401 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
DENND4AQ7Z401 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
DENND4AQ7Z401 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DENND4AQ7Z401 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
DENND4AQ7Z401 KRT18P29-201ENST00000397031 1267 ntBASIC22.27■■□□□ 1.16
DENND4AQ7Z401 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC22.27■■□□□ 1.16
DENND4AQ7Z401 TERF1P5-201ENST00000477545 1207 ntBASIC22.27■■□□□ 1.16
DENND4AQ7Z401 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.27■■□□□ 1.16
DENND4AQ7Z401 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
DENND4AQ7Z401 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC22.27■■□□□ 1.16
DENND4AQ7Z401 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC22.27■■□□□ 1.16
DENND4AQ7Z401 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DENND4AQ7Z401 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.27■■□□□ 1.16
DENND4AQ7Z401 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DENND4AQ7Z401 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
DENND4AQ7Z401 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
DENND4AQ7Z401 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
DENND4AQ7Z401 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
DENND4AQ7Z401 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC22.26■■□□□ 1.15
DENND4AQ7Z401 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC22.26■■□□□ 1.15
DENND4AQ7Z401 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC22.26■■□□□ 1.15
DENND4AQ7Z401 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DENND4AQ7Z401 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
DENND4AQ7Z401 AC092068.2-201ENST00000590491 1708 ntBASIC22.26■■□□□ 1.15
DENND4AQ7Z401 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DENND4AQ7Z401 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.26■■□□□ 1.15
DENND4AQ7Z401 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms