Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.35■□□□□ 0.69
SHFQ7M4L6 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.35■□□□□ 0.69
SHFQ7M4L6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.34■□□□□ 0.69
SHFQ7M4L6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHFQ7M4L6 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.34■□□□□ 0.69
SHFQ7M4L6 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHFQ7M4L6 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHFQ7M4L6 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SHFQ7M4L6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SHFQ7M4L6 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.34■□□□□ 0.69
SHFQ7M4L6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
SHFQ7M4L6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHFQ7M4L6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHFQ7M4L6 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHFQ7M4L6 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
SHFQ7M4L6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
SHFQ7M4L6 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
SHFQ7M4L6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.33■□□□□ 0.69
SHFQ7M4L6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SHFQ7M4L6 AC026471.6-201ENST00000622954 1905 ntBASIC19.33■□□□□ 0.69
SHFQ7M4L6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.33■□□□□ 0.69
SHFQ7M4L6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.69
SHFQ7M4L6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SHFQ7M4L6 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SHFQ7M4L6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SHFQ7M4L6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SHFQ7M4L6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SHFQ7M4L6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SHFQ7M4L6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SHFQ7M4L6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SHFQ7M4L6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SHFQ7M4L6 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
SHFQ7M4L6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SHFQ7M4L6 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SHFQ7M4L6 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHFQ7M4L6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHFQ7M4L6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SHFQ7M4L6 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.32■□□□□ 0.68
SHFQ7M4L6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHFQ7M4L6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHFQ7M4L6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SHFQ7M4L6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.32■□□□□ 0.68
SHFQ7M4L6 AL117332.1-201ENST00000622628 974 ntBASIC19.32■□□□□ 0.68
SHFQ7M4L6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHFQ7M4L6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHFQ7M4L6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SHFQ7M4L6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SHFQ7M4L6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHFQ7M4L6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHFQ7M4L6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHFQ7M4L6 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.32■□□□□ 0.68
SHFQ7M4L6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHFQ7M4L6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SHFQ7M4L6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SHFQ7M4L6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
SHFQ7M4L6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.31■□□□□ 0.68
SHFQ7M4L6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHFQ7M4L6 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SHFQ7M4L6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SHFQ7M4L6 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SHFQ7M4L6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
SHFQ7M4L6 AL451085.2-201ENST00000605085 799 ntBASIC19.31■□□□□ 0.68
SHFQ7M4L6 AL499627.2-201ENST00000606283 725 ntBASIC19.31■□□□□ 0.68
SHFQ7M4L6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SHFQ7M4L6 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.31■□□□□ 0.68
SHFQ7M4L6 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHFQ7M4L6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SHFQ7M4L6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHFQ7M4L6 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHFQ7M4L6 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.31■□□□□ 0.68
SHFQ7M4L6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.31■□□□□ 0.68
SHFQ7M4L6 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SHFQ7M4L6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHFQ7M4L6 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHFQ7M4L6 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHFQ7M4L6 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHFQ7M4L6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHFQ7M4L6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHFQ7M4L6 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHFQ7M4L6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHFQ7M4L6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.3■□□□□ 0.68
SHFQ7M4L6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
SHFQ7M4L6 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.3■□□□□ 0.68
SHFQ7M4L6 AC241377.3-202ENST00000626088 1088 ntBASIC19.3■□□□□ 0.68
SHFQ7M4L6 AC241585.3-202ENST00000628937 1088 ntBASIC19.3■□□□□ 0.68
SHFQ7M4L6 AC245100.8-202ENST00000629247 1058 ntBASIC19.3■□□□□ 0.68
SHFQ7M4L6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.3■□□□□ 0.68
SHFQ7M4L6 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.3■□□□□ 0.68
SHFQ7M4L6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHFQ7M4L6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.3■□□□□ 0.68
SHFQ7M4L6 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.3■□□□□ 0.68
SHFQ7M4L6 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHFQ7M4L6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SHFQ7M4L6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.29■□□□□ 0.68
SHFQ7M4L6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHFQ7M4L6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.29■□□□□ 0.68
SHFQ7M4L6 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHFQ7M4L6 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHFQ7M4L6 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHFQ7M4L6 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms