Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.49■■□□□ 1.03
RAPH1Q70E73 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAPH1Q70E73 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.49■■□□□ 1.03
RAPH1Q70E73 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.49■■□□□ 1.03
RAPH1Q70E73 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
RAPH1Q70E73 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAPH1Q70E73 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.49■■□□□ 1.03
RAPH1Q70E73 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.49■■□□□ 1.03
RAPH1Q70E73 AL031602.1-201ENST00000633169 911 ntBASIC21.49■■□□□ 1.03
RAPH1Q70E73 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RAPH1Q70E73 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAPH1Q70E73 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAPH1Q70E73 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
RAPH1Q70E73 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
RAPH1Q70E73 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPH1Q70E73 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPH1Q70E73 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.48■■□□□ 1.03
RAPH1Q70E73 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RAPH1Q70E73 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPH1Q70E73 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.48■■□□□ 1.03
RAPH1Q70E73 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
RAPH1Q70E73 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.48■■□□□ 1.03
RAPH1Q70E73 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.48■■□□□ 1.03
RAPH1Q70E73 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPH1Q70E73 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
RAPH1Q70E73 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPH1Q70E73 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPH1Q70E73 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.48■■□□□ 1.03
RAPH1Q70E73 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.48■■□□□ 1.03
RAPH1Q70E73 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.48■■□□□ 1.03
RAPH1Q70E73 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.48■■□□□ 1.03
RAPH1Q70E73 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RAPH1Q70E73 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.48■■□□□ 1.03
RAPH1Q70E73 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPH1Q70E73 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.48■■□□□ 1.03
RAPH1Q70E73 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPH1Q70E73 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPH1Q70E73 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RAPH1Q70E73 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPH1Q70E73 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPH1Q70E73 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.47■■□□□ 1.03
RAPH1Q70E73 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
RAPH1Q70E73 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
RAPH1Q70E73 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAPH1Q70E73 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RAPH1Q70E73 GUSBP5-201ENST00000418136 578 ntBASIC21.47■■□□□ 1.03
RAPH1Q70E73 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.47■■□□□ 1.03
RAPH1Q70E73 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.47■■□□□ 1.03
RAPH1Q70E73 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.47■■□□□ 1.03
RAPH1Q70E73 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAPH1Q70E73 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAPH1Q70E73 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAPH1Q70E73 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.46■■□□□ 1.03
RAPH1Q70E73 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAPH1Q70E73 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAPH1Q70E73 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.46■■□□□ 1.03
RAPH1Q70E73 AC244015.2-201ENST00000616358 1861 ntBASIC21.46■■□□□ 1.03
RAPH1Q70E73 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.46■■□□□ 1.03
RAPH1Q70E73 AC079089.2-201ENST00000531211 1277 ntBASIC21.46■■□□□ 1.03
RAPH1Q70E73 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RAPH1Q70E73 MIR3621-201ENST00000580529 85 ntBASIC21.46■■□□□ 1.03
RAPH1Q70E73 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
RAPH1Q70E73 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.46■■□□□ 1.03
RAPH1Q70E73 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAPH1Q70E73 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAPH1Q70E73 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RAPH1Q70E73 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAPH1Q70E73 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.46■■□□□ 1.03
RAPH1Q70E73 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.45■■□□□ 1.02
RAPH1Q70E73 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.45■■□□□ 1.02
RAPH1Q70E73 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.45■■□□□ 1.02
RAPH1Q70E73 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAPH1Q70E73 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.45■■□□□ 1.02
RAPH1Q70E73 SRD5A1P1-201ENST00000442297 786 ntBASIC21.45■■□□□ 1.02
RAPH1Q70E73 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAPH1Q70E73 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RAPH1Q70E73 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAPH1Q70E73 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAPH1Q70E73 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.45■■□□□ 1.02
RAPH1Q70E73 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAPH1Q70E73 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAPH1Q70E73 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.45■■□□□ 1.02
RAPH1Q70E73 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RAPH1Q70E73 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.45■■□□□ 1.02
RAPH1Q70E73 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAPH1Q70E73 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAPH1Q70E73 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAPH1Q70E73 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RAPH1Q70E73 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.44■■□□□ 1.02
RAPH1Q70E73 MIR3181-201ENST00000578512 73 ntBASIC21.44■■□□□ 1.02
RAPH1Q70E73 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
RAPH1Q70E73 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.44■■□□□ 1.02
RAPH1Q70E73 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAPH1Q70E73 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAPH1Q70E73 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
RAPH1Q70E73 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.44■■□□□ 1.02
RAPH1Q70E73 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.44■■□□□ 1.02
RAPH1Q70E73 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAPH1Q70E73 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
RAPH1Q70E73 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms