Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDHR3Q6ZTQ4 Z98882.1-201ENST00000622160 2253 ntBASIC21.55■■□□□ 1.04
CDHR3Q6ZTQ4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CDHR3Q6ZTQ4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CDHR3Q6ZTQ4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.55■■□□□ 1.04
CDHR3Q6ZTQ4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDHR3Q6ZTQ4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CDHR3Q6ZTQ4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDHR3Q6ZTQ4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.54■■□□□ 1.04
CDHR3Q6ZTQ4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.54■■□□□ 1.04
CDHR3Q6ZTQ4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.54■■□□□ 1.04
CDHR3Q6ZTQ4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.54■■□□□ 1.04
CDHR3Q6ZTQ4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.54■■□□□ 1.04
CDHR3Q6ZTQ4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDHR3Q6ZTQ4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
CDHR3Q6ZTQ4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDHR3Q6ZTQ4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDHR3Q6ZTQ4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CDHR3Q6ZTQ4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDHR3Q6ZTQ4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CDHR3Q6ZTQ4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.53■■□□□ 1.04
CDHR3Q6ZTQ4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.53■■□□□ 1.04
CDHR3Q6ZTQ4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.53■■□□□ 1.04
CDHR3Q6ZTQ4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDHR3Q6ZTQ4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDHR3Q6ZTQ4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CDHR3Q6ZTQ4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDHR3Q6ZTQ4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDHR3Q6ZTQ4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.52■■□□□ 1.04
CDHR3Q6ZTQ4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.52■■□□□ 1.04
CDHR3Q6ZTQ4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDHR3Q6ZTQ4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDHR3Q6ZTQ4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDHR3Q6ZTQ4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.52■■□□□ 1.04
CDHR3Q6ZTQ4 AL031432.3-201ENST00000607698 485 ntBASIC21.52■■□□□ 1.04
CDHR3Q6ZTQ4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CDHR3Q6ZTQ4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDHR3Q6ZTQ4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDHR3Q6ZTQ4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.52■■□□□ 1.04
CDHR3Q6ZTQ4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDHR3Q6ZTQ4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CDHR3Q6ZTQ4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDHR3Q6ZTQ4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CDHR3Q6ZTQ4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
CDHR3Q6ZTQ4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDHR3Q6ZTQ4 AC026471.6-201ENST00000622954 1905 ntBASIC21.51■■□□□ 1.03
CDHR3Q6ZTQ4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDHR3Q6ZTQ4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.51■■□□□ 1.03
CDHR3Q6ZTQ4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.51■■□□□ 1.03
CDHR3Q6ZTQ4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.51■■□□□ 1.03
CDHR3Q6ZTQ4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.51■■□□□ 1.03
CDHR3Q6ZTQ4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDHR3Q6ZTQ4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CDHR3Q6ZTQ4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.51■■□□□ 1.03
CDHR3Q6ZTQ4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDHR3Q6ZTQ4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDHR3Q6ZTQ4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDHR3Q6ZTQ4 AC073130.3-201ENST00000624389 2278 ntBASIC21.5■■□□□ 1.03
CDHR3Q6ZTQ4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDHR3Q6ZTQ4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDHR3Q6ZTQ4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
CDHR3Q6ZTQ4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.5■■□□□ 1.03
CDHR3Q6ZTQ4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.5■■□□□ 1.03
CDHR3Q6ZTQ4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.5■■□□□ 1.03
CDHR3Q6ZTQ4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDHR3Q6ZTQ4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.5■■□□□ 1.03
CDHR3Q6ZTQ4 MIR4767-201ENST00000582827 78 ntBASIC21.5■■□□□ 1.03
CDHR3Q6ZTQ4 AL138724.1-201ENST00000606771 1088 ntBASIC21.5■■□□□ 1.03
CDHR3Q6ZTQ4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDHR3Q6ZTQ4 FEM1AP4-201ENST00000443167 1987 ntBASIC21.5■■□□□ 1.03
CDHR3Q6ZTQ4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDHR3Q6ZTQ4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CDHR3Q6ZTQ4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDHR3Q6ZTQ4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
CDHR3Q6ZTQ4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDHR3Q6ZTQ4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDHR3Q6ZTQ4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CDHR3Q6ZTQ4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDHR3Q6ZTQ4 EDA-201ENST00000338901 1233 ntBASIC21.49■■□□□ 1.03
CDHR3Q6ZTQ4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.49■■□□□ 1.03
CDHR3Q6ZTQ4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.49■■□□□ 1.03
CDHR3Q6ZTQ4 AL499627.2-201ENST00000606283 725 ntBASIC21.49■■□□□ 1.03
CDHR3Q6ZTQ4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.49■■□□□ 1.03
CDHR3Q6ZTQ4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDHR3Q6ZTQ4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDHR3Q6ZTQ4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDHR3Q6ZTQ4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDHR3Q6ZTQ4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDHR3Q6ZTQ4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CDHR3Q6ZTQ4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDHR3Q6ZTQ4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDHR3Q6ZTQ4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.48■■□□□ 1.03
CDHR3Q6ZTQ4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.48■■□□□ 1.03
CDHR3Q6ZTQ4 SUDS3P1-201ENST00000505831 966 ntBASIC21.48■■□□□ 1.03
CDHR3Q6ZTQ4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.48■■□□□ 1.03
CDHR3Q6ZTQ4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.48■■□□□ 1.03
CDHR3Q6ZTQ4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.48■■□□□ 1.03
CDHR3Q6ZTQ4 AC142381.2-201ENST00000566120 298 ntBASIC21.48■■□□□ 1.03
CDHR3Q6ZTQ4 MIR3181-201ENST00000578512 73 ntBASIC21.48■■□□□ 1.03
CDHR3Q6ZTQ4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms