Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
RNF111Q6ZNA4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF111Q6ZNA4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF111Q6ZNA4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.77■□□□□ 0.92
RNF111Q6ZNA4 DUX4L4-201ENST00000566884 1269 ntBASIC20.77■□□□□ 0.92
RNF111Q6ZNA4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF111Q6ZNA4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF111Q6ZNA4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF111Q6ZNA4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
RNF111Q6ZNA4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.77■□□□□ 0.91
RNF111Q6ZNA4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RNF111Q6ZNA4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RNF111Q6ZNA4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RNF111Q6ZNA4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
RNF111Q6ZNA4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF111Q6ZNA4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF111Q6ZNA4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF111Q6ZNA4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF111Q6ZNA4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF111Q6ZNA4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF111Q6ZNA4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF111Q6ZNA4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF111Q6ZNA4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RNF111Q6ZNA4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF111Q6ZNA4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF111Q6ZNA4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RNF111Q6ZNA4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF111Q6ZNA4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF111Q6ZNA4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
RNF111Q6ZNA4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RNF111Q6ZNA4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
RNF111Q6ZNA4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
RNF111Q6ZNA4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF111Q6ZNA4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF111Q6ZNA4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF111Q6ZNA4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
RNF111Q6ZNA4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RNF111Q6ZNA4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RNF111Q6ZNA4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF111Q6ZNA4 AC006455.2-201ENST00000429931 906 ntBASIC20.75■□□□□ 0.91
RNF111Q6ZNA4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF111Q6ZNA4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.75■□□□□ 0.91
RNF111Q6ZNA4 SYT6-210ENST00000641643 1587 ntBASIC20.75■□□□□ 0.91
RNF111Q6ZNA4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF111Q6ZNA4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RNF111Q6ZNA4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF111Q6ZNA4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
RNF111Q6ZNA4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF111Q6ZNA4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF111Q6ZNA4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF111Q6ZNA4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.74■□□□□ 0.91
RNF111Q6ZNA4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RNF111Q6ZNA4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF111Q6ZNA4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF111Q6ZNA4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
RNF111Q6ZNA4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF111Q6ZNA4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.74■□□□□ 0.91
RNF111Q6ZNA4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.74■□□□□ 0.91
RNF111Q6ZNA4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF111Q6ZNA4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF111Q6ZNA4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF111Q6ZNA4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF111Q6ZNA4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF111Q6ZNA4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF111Q6ZNA4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF111Q6ZNA4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF111Q6ZNA4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF111Q6ZNA4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF111Q6ZNA4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF111Q6ZNA4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF111Q6ZNA4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF111Q6ZNA4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.73■□□□□ 0.91
RNF111Q6ZNA4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF111Q6ZNA4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF111Q6ZNA4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RNF111Q6ZNA4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF111Q6ZNA4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF111Q6ZNA4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF111Q6ZNA4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.73■□□□□ 0.91
RNF111Q6ZNA4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF111Q6ZNA4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF111Q6ZNA4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RNF111Q6ZNA4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF111Q6ZNA4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RNF111Q6ZNA4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF111Q6ZNA4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF111Q6ZNA4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF111Q6ZNA4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.72■□□□□ 0.91
RNF111Q6ZNA4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF111Q6ZNA4 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.72■□□□□ 0.91
RNF111Q6ZNA4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF111Q6ZNA4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF111Q6ZNA4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF111Q6ZNA4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF111Q6ZNA4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF111Q6ZNA4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF111Q6ZNA4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF111Q6ZNA4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF111Q6ZNA4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.72■□□□□ 0.91
RNF111Q6ZNA4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms