Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
PPP4R3CPQ6ZMV5 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
PPP4R3CPQ6ZMV5 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PPP4R3CPQ6ZMV5 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC24.3■■□□□ 1.48
PPP4R3CPQ6ZMV5 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
PPP4R3CPQ6ZMV5 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
PPP4R3CPQ6ZMV5 MIR935-201ENST00000401179 91 ntBASIC24.3■■□□□ 1.48
PPP4R3CPQ6ZMV5 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
PPP4R3CPQ6ZMV5 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC24.3■■□□□ 1.48
PPP4R3CPQ6ZMV5 STOX2-205ENST00000513034 807 ntTSL 3 BASIC24.3■■□□□ 1.48
PPP4R3CPQ6ZMV5 AC003956.1-201ENST00000598450 356 ntTSL 3 BASIC24.3■■□□□ 1.48
PPP4R3CPQ6ZMV5 AC097478.2-201ENST00000610572 514 ntBASIC24.3■■□□□ 1.48
PPP4R3CPQ6ZMV5 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PPP4R3CPQ6ZMV5 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
PPP4R3CPQ6ZMV5 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC24.3■■□□□ 1.48
PPP4R3CPQ6ZMV5 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PPP4R3CPQ6ZMV5 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PPP4R3CPQ6ZMV5 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.29■■□□□ 1.48
PPP4R3CPQ6ZMV5 AC079834.2-201ENST00000609776 1949 ntBASIC24.29■■□□□ 1.48
PPP4R3CPQ6ZMV5 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PPP4R3CPQ6ZMV5 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PPP4R3CPQ6ZMV5 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PPP4R3CPQ6ZMV5 TRMT13-201ENST00000370139 711 ntTSL 3 BASIC24.29■■□□□ 1.48
PPP4R3CPQ6ZMV5 AC003986.3-201ENST00000417460 692 ntTSL 3 BASIC24.29■■□□□ 1.48
PPP4R3CPQ6ZMV5 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PPP4R3CPQ6ZMV5 SEPHS1P7-201ENST00000452995 1177 ntBASIC24.29■■□□□ 1.48
PPP4R3CPQ6ZMV5 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
PPP4R3CPQ6ZMV5 AC084782.3-201ENST00000612282 578 ntBASIC24.29■■□□□ 1.48
PPP4R3CPQ6ZMV5 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC24.29■■□□□ 1.48
PPP4R3CPQ6ZMV5 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PPP4R3CPQ6ZMV5 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PPP4R3CPQ6ZMV5 GUSBP5-202ENST00000510805 1989 ntBASIC24.29■■□□□ 1.48
PPP4R3CPQ6ZMV5 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
PPP4R3CPQ6ZMV5 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPP4R3CPQ6ZMV5 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPP4R3CPQ6ZMV5 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PPP4R3CPQ6ZMV5 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPP4R3CPQ6ZMV5 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC24.28■■□□□ 1.48
PPP4R3CPQ6ZMV5 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC24.28■■□□□ 1.48
PPP4R3CPQ6ZMV5 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC24.28■■□□□ 1.48
PPP4R3CPQ6ZMV5 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.28■■□□□ 1.48
PPP4R3CPQ6ZMV5 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PPP4R3CPQ6ZMV5 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC24.28■■□□□ 1.48
PPP4R3CPQ6ZMV5 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC24.28■■□□□ 1.48
PPP4R3CPQ6ZMV5 AC010525.1-201ENST00000585559 441 ntBASIC24.28■■□□□ 1.48
PPP4R3CPQ6ZMV5 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC24.28■■□□□ 1.48
PPP4R3CPQ6ZMV5 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPP4R3CPQ6ZMV5 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPP4R3CPQ6ZMV5 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PPP4R3CPQ6ZMV5 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
PPP4R3CPQ6ZMV5 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
PPP4R3CPQ6ZMV5 COA1-202ENST00000310564 1085 ntAPPRIS P3 TSL 2 BASIC24.27■■□□□ 1.48
PPP4R3CPQ6ZMV5 GRAMD4P2-201ENST00000423297 1097 ntBASIC24.27■■□□□ 1.48
PPP4R3CPQ6ZMV5 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PPP4R3CPQ6ZMV5 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
PPP4R3CPQ6ZMV5 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.27■■□□□ 1.48
PPP4R3CPQ6ZMV5 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PPP4R3CPQ6ZMV5 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
PPP4R3CPQ6ZMV5 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PPP4R3CPQ6ZMV5 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC24.26■■□□□ 1.47
PPP4R3CPQ6ZMV5 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PPP4R3CPQ6ZMV5 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
PPP4R3CPQ6ZMV5 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
PPP4R3CPQ6ZMV5 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
PPP4R3CPQ6ZMV5 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
PPP4R3CPQ6ZMV5 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PPP4R3CPQ6ZMV5 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.26■■□□□ 1.47
PPP4R3CPQ6ZMV5 AC126544.1-201ENST00000580842 1059 ntBASIC24.26■■□□□ 1.47
PPP4R3CPQ6ZMV5 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
PPP4R3CPQ6ZMV5 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PPP4R3CPQ6ZMV5 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
PPP4R3CPQ6ZMV5 STX4-202ENST00000394998 1498 ntTSL 2 BASIC24.26■■□□□ 1.47
PPP4R3CPQ6ZMV5 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
PPP4R3CPQ6ZMV5 AC118282.1-201ENST00000506408 765 ntBASIC24.25■■□□□ 1.47
PPP4R3CPQ6ZMV5 AC112220.4-201ENST00000604982 1263 ntBASIC24.25■■□□□ 1.47
PPP4R3CPQ6ZMV5 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC24.25■■□□□ 1.47
PPP4R3CPQ6ZMV5 AP000720.1-201ENST00000625091 483 ntBASIC24.25■■□□□ 1.47
PPP4R3CPQ6ZMV5 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
PPP4R3CPQ6ZMV5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
PPP4R3CPQ6ZMV5 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC24.25■■□□□ 1.47
PPP4R3CPQ6ZMV5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PPP4R3CPQ6ZMV5 ECEL1P1-201ENST00000373592 1742 ntBASIC24.24■■□□□ 1.47
PPP4R3CPQ6ZMV5 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PPP4R3CPQ6ZMV5 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PPP4R3CPQ6ZMV5 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PPP4R3CPQ6ZMV5 LGR4-203ENST00000480977 492 ntTSL 2 BASIC24.24■■□□□ 1.47
PPP4R3CPQ6ZMV5 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC24.24■■□□□ 1.47
PPP4R3CPQ6ZMV5 AP000280.1-201ENST00000624800 832 ntBASIC24.24■■□□□ 1.47
PPP4R3CPQ6ZMV5 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC24.24■■□□□ 1.47
PPP4R3CPQ6ZMV5 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PPP4R3CPQ6ZMV5 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PPP4R3CPQ6ZMV5 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.24■■□□□ 1.47
PPP4R3CPQ6ZMV5 AC087742.1-201ENST00000575880 1738 ntBASIC24.24■■□□□ 1.47
PPP4R3CPQ6ZMV5 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PPP4R3CPQ6ZMV5 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PPP4R3CPQ6ZMV5 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
PPP4R3CPQ6ZMV5 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PPP4R3CPQ6ZMV5 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PPP4R3CPQ6ZMV5 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
PPP4R3CPQ6ZMV5 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms