Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 AC110285.6-201ENST00000617652 491 ntBASIC19.26■□□□□ 0.67
LRFN4Q6PJG9 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRFN4Q6PJG9 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRFN4Q6PJG9 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRFN4Q6PJG9 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
LRFN4Q6PJG9 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRFN4Q6PJG9 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
LRFN4Q6PJG9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LRFN4Q6PJG9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRFN4Q6PJG9 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRFN4Q6PJG9 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.25■□□□□ 0.67
LRFN4Q6PJG9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRFN4Q6PJG9 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRFN4Q6PJG9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.25■□□□□ 0.67
LRFN4Q6PJG9 AC106739.1-201ENST00000617035 715 ntBASIC19.25■□□□□ 0.67
LRFN4Q6PJG9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRFN4Q6PJG9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRFN4Q6PJG9 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRFN4Q6PJG9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LRFN4Q6PJG9 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
LRFN4Q6PJG9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRFN4Q6PJG9 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.25■□□□□ 0.67
LRFN4Q6PJG9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LRFN4Q6PJG9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRFN4Q6PJG9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRFN4Q6PJG9 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRFN4Q6PJG9 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRFN4Q6PJG9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
LRFN4Q6PJG9 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRFN4Q6PJG9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRFN4Q6PJG9 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.24■□□□□ 0.67
LRFN4Q6PJG9 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRFN4Q6PJG9 BX842568.3-201ENST00000418104 571 ntBASIC19.24■□□□□ 0.67
LRFN4Q6PJG9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.24■□□□□ 0.67
LRFN4Q6PJG9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.24■□□□□ 0.67
LRFN4Q6PJG9 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.24■□□□□ 0.67
LRFN4Q6PJG9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.24■□□□□ 0.67
LRFN4Q6PJG9 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRFN4Q6PJG9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRFN4Q6PJG9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRFN4Q6PJG9 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRFN4Q6PJG9 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRFN4Q6PJG9 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRFN4Q6PJG9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
LRFN4Q6PJG9 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.23■□□□□ 0.67
LRFN4Q6PJG9 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
LRFN4Q6PJG9 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.23■□□□□ 0.67
LRFN4Q6PJG9 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.23■□□□□ 0.67
LRFN4Q6PJG9 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRFN4Q6PJG9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
LRFN4Q6PJG9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRFN4Q6PJG9 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.23■□□□□ 0.67
LRFN4Q6PJG9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
LRFN4Q6PJG9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
LRFN4Q6PJG9 AP005435.1-201ENST00000529293 1178 ntBASIC19.23■□□□□ 0.67
LRFN4Q6PJG9 AC079089.2-201ENST00000531211 1277 ntBASIC19.23■□□□□ 0.67
LRFN4Q6PJG9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.23■□□□□ 0.67
LRFN4Q6PJG9 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.23■□□□□ 0.67
LRFN4Q6PJG9 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.23■□□□□ 0.67
LRFN4Q6PJG9 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRFN4Q6PJG9 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
LRFN4Q6PJG9 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRFN4Q6PJG9 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRFN4Q6PJG9 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
LRFN4Q6PJG9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRFN4Q6PJG9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.22■□□□□ 0.67
LRFN4Q6PJG9 AC010141.3-201ENST00000456659 717 ntBASIC19.22■□□□□ 0.67
LRFN4Q6PJG9 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.22■□□□□ 0.67
LRFN4Q6PJG9 AC233992.3-201ENST00000607491 485 ntBASIC19.22■□□□□ 0.67
LRFN4Q6PJG9 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRFN4Q6PJG9 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
LRFN4Q6PJG9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRFN4Q6PJG9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRFN4Q6PJG9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
LRFN4Q6PJG9 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.21■□□□□ 0.67
LRFN4Q6PJG9 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRFN4Q6PJG9 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRFN4Q6PJG9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRFN4Q6PJG9 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRFN4Q6PJG9 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
LRFN4Q6PJG9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRFN4Q6PJG9 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRFN4Q6PJG9 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRFN4Q6PJG9 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.21■□□□□ 0.67
LRFN4Q6PJG9 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.21■□□□□ 0.67
LRFN4Q6PJG9 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.21■□□□□ 0.67
LRFN4Q6PJG9 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.21■□□□□ 0.67
LRFN4Q6PJG9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRFN4Q6PJG9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRFN4Q6PJG9 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.21■□□□□ 0.67
LRFN4Q6PJG9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRFN4Q6PJG9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRFN4Q6PJG9 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
LRFN4Q6PJG9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRFN4Q6PJG9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.2■□□□□ 0.66
LRFN4Q6PJG9 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
LRFN4Q6PJG9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
LRFN4Q6PJG9 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.2■□□□□ 0.66
LRFN4Q6PJG9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
LRFN4Q6PJG9 AC087239.1-201ENST00000622671 572 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms